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Submitted SNP(ss) Details: ss314159           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-11
RefSNP(rs#)rs151784
Submitted Batch IDOVLP-000621-1
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:CITB-H1_2020C3 SequenceAccession1:AC020918 SequenceContigName1:Contig47 SequenceContigPosition1:830 SequenceLocalName2:CIT978SKA_420A11 SequenceAccession2:AC008595 SequenceContigName2:Contig192 SequenceContigPosition2:10185 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss314159|allelePos=116|len=1116|taxid=9606|alleles='T/C'|mol=Genomic
 ATGTTGATTT GGACAAAAGT GAATGTAGTA AAATGGGAAA AAAATCCTGA AGGCTGGCAT
 CAAAATAACT CTTAAACAAT GAACTATTAC AGAGATTTCC acttgagtca tgact
 Y
 atgccatctt cccctcaagt gcaacataag gtaagctgaa ctttgtgcag atgtggccaa
 gatgatggga ctccctctcc cctaagcttc caatcaaggg ttactgtatc ttattagtag
 gggcagtctg ccagcatttc taatcccctt caactcaaat ttaaaagact aatttcctgg
 tgattgtggc tgagaggctg ggggctccct tacttcaccc agtcttcttc atgcataaga
 aagaggcttt atattaggtt cagcaagaca agaatattga taccctaatt tccctcgttg
 caacttatta taggggagag gtttcacaag agaagaggca agccaagaag actggaagct
 actgctctgc tcagctccta gaatagtggc ttggagactg cccaggggaa aaggcagtct
 gtaagaaaaa actctgaaat cctccccaaa gaaactaact ttatttgaaa cataaggttc
 aagcctaatg ctgctcttga aaataatttc ttctctaaat taagagcaac aagctgaact
 tcaggacatc tagttcacca gcgagaacca gaacaaggga caagtaagaa gagcccttaa
 aactgtctct gcctgaattt aattggatca gactgctgag caatttatac tctagagcat
 tttttaaaac aatagagtaa ttagttgata attactggag gctaatgggc tggcatgtaa
 cacagaatga ggcacacagt ttaacagaga gagtagagaa aaagacaaag agagccttgc
 caaattcact gtcatcccag gggtgacggt gtgaatgccc aaggctgtac cctctgaaga
 gtggcatcaa aagcttCACA GAGTGGAACA AATATAATTT ACTAAAATAT CCTAGCCAAG
 TCACAAAATA AGCAAACAAT ATCAAAAACA AGCTCAGAAG AGGGAGGAAG CAAATCTGTA
 CCCAGAATTG CTACAATATA TTCCCTAAAA TAACCAATTT

  Submitted Frequency for ss314159 back to top
There is no frequency submission for ss314159.


  dbSNP summary of Genotypes for ss314159 back to top
No sufficient data to compute Hardy-weinberg probability for ss314159.


  Submitted individual genotype for ss314159 back to top
There is no individual genotype data for ss314159.

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