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Submitted SNP(ss) Details: ss314161           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-17
RefSNP(rs#)rs151785
Submitted Batch IDOVLP-000621-1
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:CITB-H1_2020C3 SequenceAccession1:AC020918 SequenceContigName1:Contig48 SequenceContigPosition1:5576 SequenceLocalName2:CIT978SKA_420A11 SequenceAccession2:AC008595 SequenceContigName2:Contig179 SequenceContigPosition2:618 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss314161|allelePos=1001|len=2001|taxid=9606|alleles='T/C'|mol=Genomic
 AGAtgggtct tatttttatg tccaacttgc cactctgtgc cttttaagtg gggtgcatag
 gtcatttaca ttcaaagtta atattcatat gtgaggtttt gatcctacca taaaattgga
 agctggttgc tttgtagttt atattgtatt ttatctttat acagtctgca agtgatgtac
 ttgtgtgttt tttgtggtag cattgtagtg tctattgtac tttttcttta tagggtctgc
 aggctatgta cataagtgtg attttgtggt aggaggtatc actctctttt tttcctgttt
 agaactcgca taagaatctc ttgtaaggct tagctaatgg taataaaatt ccttaccact
 tacttgtcta gaaaagattt tatttccccc ttgcttataa agcttagttt ggggggatat
 gaaattattg gttgaatttt ttttttcctt atgatgctga acataggccc ccaatctctc
 ctgacatgta aagtttctgc tgagaactcc cttgttaacc tgatggggtt ccttttgtat
 gtgatatgcc ctttttctcc agctgccttt gaggtttttt ctttagtcat tgactttgga
 cagtgtggtg atgatacacc ttgataagta ttgttttgtg tagtatcttt caggtgttct
 ttggatttct tgtatccgga tgtctgtctc taacaagatt agggatgttt tcttgaatta
 tttcctcaaa tatatgtttt agattctttg ctttttctcc ttctatttta gaaatgccac
 taacttgtag gtttggtcac tttacaaaat ctcatatttc ttgaagacgt tgctcatttt
 ttaaaaaatt attttttctt tatttctgaa attctttctt ctgcttgggc caatctgttg
 ataaagcttt caactgtatt ttgaaattcc ttcagttagg ttttcaattc cagaagctgt
 gactgatttc tttttaagat gttatctctt ccttcatttc
 Y
 tggattgctt tagaagttat tttctgttga ctttcaaccc tgtcttggat ctcagtgagc
 caccttgcaa tccatgcttt gaattcttta tgtatcattt ctgaatttcc atttcagtta
 ggaaccattg ttggagagct agggcaatcc tttggtggtg tcactacatt cgtatttttc
 gtggtgcaag aattattgca ctggctccct cttatctgga gacactaaca cttctaattt
 ttgtaattat ttttgtgtgg gtagaatatt ttctttttct ttctttccct attatgttag
 tataccatca tttttctttc cctttccttc ctaaggggtg tgactgtaga gaatgctgag
 taaggtcttt aggctctgct tctttaaccc tgtgtacttc tttcagcaga ttttacattg
 ggttgtgcaa tttggcccac aagcccatag attacactta taggtaagag ccagctgcag
 ccaatgtggt tgggtatata cttgattttt tttttttact tgcaacagca ctctgttgcc
 tcaggcaatg ggttaatttg tagaatgcac agtggtctaa gctccctgct tagcccctgg
 ggagctggaa tcacaaaggg tggggccaga caaagcaggt ccacctatgt ccaggaaggg
 tggggaggct caggctgctg aaccaagtga atggggactc caaatgcctg gagatctttc
 tgggagtgga acagagagaa ccctgctgta ccacaatctc tgtacaggaa tggtggggta
 gctcagtctg ctgaaccagg tgaacagctt ttcctgagtg ccctagtgat ctgactgggc
 natggagcag aataagtctt gctgcaccaa gatctgtgtc caggaaaggt aaggtgactc
 acgatgctgg ttcaggcaag taggtgctcc aaatgcctgc atttctgcct gaaggtggat
 ccatagaggg ccttgctaca ccacaatctC ATGGGAGCAT

  Submitted Frequency for ss314161 back to top
There is no frequency submission for ss314161.


  dbSNP summary of Genotypes for ss314161 back to top
No sufficient data to compute Hardy-weinberg probability for ss314161.


  Submitted individual genotype for ss314161 back to top
There is no individual genotype data for ss314161.

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