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Submitted SNP(ss) Details: ss314167           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-32
RefSNP(rs#)rs244412
Submitted Batch IDOVLP-000621-1
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:CITB-H1_2020C3 SequenceAccession1:AC020918 SequenceContigName1:Contig51 SequenceContigPosition1:8496 SequenceLocalName2:CIT978SKA_420A11 SequenceAccession2:AC008595 SequenceContigName2:Contig177 SequenceContigPosition2:87 PolyBayesConfidence:99

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss314167|allelePos=101|len=201|taxid=9606|alleles='C/T'|mol=Genomic
 ATACAGCTCT CCCCCATCTC TTCAAGTTTT AAATAGTTTG AGGCTAGCTG TTTAATTAAT
 TGGAGTAGGT TACTGGATAC CTAAATGCTA CTACAGATGG
 Y
 ATGTCTGTTA TGTTACTGGA AAAGTTCACA GCTGGGAACA TTCCTATGCA TATGTCAAAA
 GAGAAAAGCC TTTCTTCTTG ACTAAACTCA AAGTCATAGT

  Submitted Frequency for ss314167 back to top
There is no frequency submission for ss314167.


  dbSNP summary of Genotypes for ss314167 back to top
No sufficient data to compute Hardy-weinberg probability for ss314167.


  Submitted individual genotype for ss314167 back to top
There is no individual genotype data for ss314167.

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