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Submitted SNP(ss) Details: ss3343271447           
Submitter
HandleCSHL
Submitter SNP IDLID=SNVhg19:chr1:10654
RefSNP(rs#)rs1193520547
Submitted Batch IDF23_WholeGenome_SNVs
Submitted DateOct 02, 2017
Publication Cited[1] DNA sequence level analysis reveals modifiers of phenotypic expression in a large family with psychiatric illness.
First entry to dbSNPOct 2 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodF23_WHOLE_GENOME_SEQUENCING
Ascertainment Samplesize96
PopulationScotland
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3343271447|allelePos=26|len=51|taxid=9606|alleles='G/C'|mol=Genomic
 GGCGCGCCGC GCCGGCGCAG GCGCA
 S
 AGAGGCGCGC CGCGCCGGCG CAGGC

  Submitted Frequency for ss3343271447 back to top
There is no frequency submission for ss3343271447.


  dbSNP summary of Genotypes for ss3343271447 back to top
No sufficient data to compute Hardy-weinberg probability for ss3343271447.


  Submitted individual genotype for ss3343271447 back to top
There is no individual genotype data for ss3343271447.