NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3391035           
Submitter
HandleSC_JCM
Submitter SNP IDchr_20_176587
RefSNP(rs#)rs412143
Submitted Batch ID21-SEP-2001
Submitted DateSep 24, 2001
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPSep 24 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_OVERLAP_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3391035|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 GGATCCTATA AAGGCAGTAG CTCCAAGCAC ATTACAGAGG GACCCAACTC CATTAAACCA
 CCACCAGCTC CCCAAGCCAC CCCTTCAGCC ATGAAGTTCC TGCTCCTGGT CTTGGCAGCC
 CTCGGATTCC TGACCCAGGT GATCCCAGGT AAACTGGATA AATAGGAGGA AAGGAAAACT
 GGGAACGAGG AACACTAGCA
 K
 ATCTGGTTGC TCTGGTGATA GATGAGCCAG GTTGGGTGGA GGCAGGGCTC ACCCCACTGA
 GTTCCAGTCT AAGGTAGAGA TCTCCTAACA ACCACCACTA GCCTTGATAT CCCACACCCA
 AACACCACCC TATATAACCT TTACAAAAAT TTGTTTTCTA TTCTAAAATG ATAGTCACCC
 TCAACCTAAA CCAAAATATC

  Submitted Frequency for ss3391035 back to top
There is no frequency submission for ss3391035.


  dbSNP summary of Genotypes for ss3391035 back to top
No sufficient data to compute Hardy-weinberg probability for ss3391035.


  Submitted individual genotype for ss3391035 back to top
There is no individual genotype data for ss3391035.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement