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Submitted SNP(ss) Details: ss35078008           
Submitter
HandleSSAHASNP
Submitter SNP IDTA-079.chr9_64205203
RefSNP(rs#)rs2307054
Submitted Batch IDTA-079
Submitted DateMar 11, 2005
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 11 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTA-079
Ascertainment Samplesize13
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityS9A_2-504c07.p1k 505 35S9A_3-607e24.p1k -565 48912S3-777d22.p1k -222 46912S-1045m24.q1k 253 51912S-484j19.p1k 547 56912S3-470l22.q1k -194 56S912AA-982f24.q1k -345 56S9A_2-1212i18.q1k 279 51S9A_3-122e23.q1k 639 27912S3-317m23.q1k 258 56S9A_2-832o21.q1k -165 43S912AA-1104g15.p1k -187 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35078008|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 AATCCAAACC ATCGTATAAC TCCATACTCA AGCCATACTG TCTTGATTGC CCAAGAAATT
 GCTTTTAAGA AATTGTCATA TATTTATTGT CCAAAACGTG TTTATTATAG GGTTATTGTT
 GAGGACAATG TCCCCTTTAT CGCTTGGTGA CTCCAATTAA AGGCCCCAAC AAACATTGCT
 CTCAGACTTG ATTTTGACAA
 S
 AAAACCTCTC ACATAAAATA CTGAAAGTAT GAATGTTAGA ATTCTTTTTT ATTTCCTGGA
 AGCTGAGATA CAAAAATGGA ACCAAAATTC AGTGATGTAG ATCTTTATCA TATCTTGCGT
 GGTCCTCTGA AATAGGAAGA AAACATTAAA TTTTAACTTT TGACTTTAGG GTAAAAAATC
 ACTTTTATAC AAATCAAAAG

  Submitted Frequency for ss35078008 back to top
There is no frequency submission for ss35078008.


  dbSNP summary of Genotypes for ss35078008 back to top
No sufficient data to compute Hardy-weinberg probability for ss35078008.


  Submitted individual genotype for ss35078008 back to top
There is no individual genotype data for ss35078008.

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