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Submitted SNP(ss) Details: ss35078028           
Submitter
HandleSSAHASNP
Submitter SNP IDTA-079.chr3_13666044
RefSNP(rs#)rs4389458
Submitted Batch IDTA-079
Submitted DateMar 11, 2005
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPMar 11 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTA-079
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityQ71P45FB11.0.scf -313 5147252955 792 31

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35078028|allelePos=501|len=1001|taxid=9606|alleles='T/G'|mol=Genomic
 AACTGAGGTT CAGAGAGAGT GTATGACTTG CCTAGGGCCA CACAGGGATT CAACTCTGTA
 AGGGAAACCT CATTGCTCAG GAGAATGAGA AGAAAAGCCA CAGACTGGGA GAAAATATTT
 GCAAAGGACA TAGCTGATAA ATGACTATTA TCCAAAATCT ACAAATAACT CTTAACACTC
 AATAATAGGA AAACAACCCA ATTAAAAAGT GGGCAGAAGA TCTAAACAGA CACCTCATTC
 AAGAAGATAC ACAGATGGCA AATAAGCACC TGAAAGATGC TCCACATAGG TATATCATTA
 GGGAGCTGCA AGTTAAACCA ACCATGAGAT ACTGCCACGC ACCTACTGGA GTGGCTCATA
 TCCAAAGCAC TAACACACCA AATGCTGGCG AGGATGTGGA GCACCAGGAA CTCACATTCA
 TTGCTGGTGG GAATGCAAAA TGGCACAACC ACTTTGGAAA ACAGTTTGGC TGTTTTTTTT
 TTTTTTTTTT TTTTTTTTTT
 K
 TTTTTTCAGA CAGGGTCTTT CTCTGTCACC CAGGCTGGAG TGCAGTGAAG CAATCACGAT
 TCACTGCAGC CTCAACCTAC CAGGCTCATG TGATTCTCCC ACCTCAGCCT CTTGAGTAGC
 TGGGACTACA GGCATGCACC ACCACGCCCA ACTGATTTTT GTATTTTTTG TAGAGGCGGG
 GTTTTGCCAT GTGGCCCAGC CAATCTGAAG CCAATCTGAA AAGGCTACAC ACTGTATGAT
 TCCAACAATA CAACATTCTG GAAAAGGCAA AACTATGGGA ACAGTAAAAA GATCTGTGGT
 TGCCAGGGGT TAGGGGGAAG GGAGCACAGG GGATTACGGG TGGAGTTTAG AGAATTTTTT
 GGGCGGTGAC ACTATTCTGT GTGATACAAT AATGGTGGAT AAGGGTCGTT GTACATTTGT
 CCAAACACAT GGAATGTACA GCTTCAAGAA TGAGCCCTCA CGTAAACCAT GGGCTGTGGG
 TGACACTGAT GTGGCAGTGC

  Submitted Frequency for ss35078028 back to top
There is no frequency submission for ss35078028.


  dbSNP summary of Genotypes for ss35078028 back to top
No sufficient data to compute Hardy-weinberg probability for ss35078028.


  Submitted individual genotype for ss35078028 back to top
There is no individual genotype data for ss35078028.

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