NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3526907           
Submitter
HandleSC_JCM
Submitter SNP IDAB000381.1_33820
RefSNP(rs#)rs2516374
Submitted Batch ID21-SEP-2001c
Submitted DateSep 24, 2001
Publication Cited[1] Clone overlap SNPs detected from the public human 19-Mar-2001 draft sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPSep 24 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/!a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AB000381.1position:33820seqversion:AC083841.2position:160769unfin_quality:48

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3526907|allelePos=201|len=387|taxid=9606|alleles='G/T'|mol=Genomic
 GATCACATTA GTCGTGATCA CATTAGTTGC GATCGATAAC CTTCACCAGA GGGCTTGTCC
 ATCGGATAAC ACGTACCTAG TTGGAAAGGT GCATCAAGTC TGTACTGGGG AGGAGGTTGG
 CACCAAGGGT CAAGAGCATT TATATGTTGG TCCAGGAGAG CTGAAACACC AGGCTGAGGG
 TCCCAGGAAG GAGTTTACCC
 K
 AGAGGGGTCT TGCCAACTGC AGAAAATCTA GTTAAGGCTA CATTAATAGG GACACCTCTG
 TTAAAGGTCC ATGTGATCTC TAGACCATAA GTGAAACATG ATTTCTGGTC TGCATTTAAT
 TTCTCGGGCT CTAGAATTCT TACCATAAGA AATGAACAGG ACATTTCATT GCGTGTAGCT
 ACATGA

  Submitted Frequency for ss3526907 back to top
There is no frequency submission for ss3526907.


  dbSNP summary of Genotypes for ss3526907 back to top
No sufficient data to compute Hardy-weinberg probability for ss3526907.


  Submitted individual genotype for ss3526907 back to top
There is no individual genotype data for ss3526907.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement