NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss3995639           
Submitter
HandlePERLEGEN
Submitter SNP IDP00199489
RefSNP(rs#)rs458354
Submitted Batch ID09-01
Submitted DateSep 26, 2001
Publication Cited11721056
First entry to dbSNPSep 26 2001 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWAFER_HYB
Ascertainment Samplesize12
PopulationNCBI|NIHPDR
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
position 57089

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss3995639|allelePos=101|len=201|taxid=9606|alleles='A/G'|mol=Genomic
 TTAAATCTAT TTAAAATTTT AAAGACCTTA GTAATGTAAA CAAATGGTGT TGAGTTTGGA
 CTTCTCTACA ATATCTATGT GGAATCTTAG GAAAGGAAGA
 R
 TGAAAGGATA CAATACATTT TAAATGGTAG TTCAGCCTAA ATCCTAAGCA TAAGCATAAT
 ACACTGCTGC ATTTTTTTTT GACAGAGCCT AACTCTGTCC

  Submitted Frequency for ss3995639 back to top
There is no frequency submission for ss3995639.


  dbSNP summary of Genotypes for ss3995639 back to top
No sufficient data to compute Hardy-weinberg probability for ss3995639.


  Submitted individual genotype for ss3995639 back to top
There is no individual genotype data for ss3995639.