NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss487561405           
Submitter
Handle1000GENOMES
Submitter SNP ID20110521_exome_7_chr1_865664
RefSNP(rs#)rs199655347
Submitted Batch IDphase_1_exome_sites_20110521
Submitted DateFeb 10, 2012
Publication CitedN.D.
First entry to dbSNPFeb 10 2012 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodEXOME_CAPTURE
Ascertainment Samplesize2256
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss487561405|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCCACCTTCC TCTCCTCCTG CCCCACCTTC CTCTCCTCCT GCCCCACCTT CCTCTCCTCC
 TGCCCCACCA GAACCGGGGG CGGCTGGCAG ACAAGAGGAC AGTCGCCCTG CCTGCCGCCC
 GGAACCTGAA GAAGGAGCGA ACTCCCAGCT TCTCTGCCAG CGATGGTGAC AGCGACGGGA
 GTGGCCCCAC CTGTGGGCGG
 Y
 GGCCAGGCTT GAAGCAGGAG GATGGTCCGC ACATCCGTAT CATGAAGAGA AGGTACTTGG
 ACCAGGGCCG GACAGGAAGG CGCAAGGCTC AGATGGGGCT GGAGCTTCAG GCCTTCAGCT
 GCTCAGATGA GAGTGTCCAC ACCGGCCTCC CACACCTTCC CTCAGATGCT GGTCTTTTTG
 GGGTCCTGTG TGGGTCGCAG

  Submitted Frequency for ss487561405 back to top
There is no frequency submission for ss487561405.


  dbSNP summary of Genotypes for ss487561405 back to top
No sufficient data to compute Hardy-weinberg probability for ss487561405.


  Submitted individual genotype for ss487561405 back to top
There is no individual genotype data for ss487561405.