NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss5236550           
Submitter
HandleTSC-CSHL
Submitter SNP IDTSC1748343
RefSNP(rs#)rs3860746
Submitted Batch IDTSC-CSHL-Sep-19-2002-SNP_SUBMISSION-31
Submitted DateSep 20, 2002
Publication CitedN.D.
First entry to dbSNPSep 20 2002 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTSC-CSHL-31
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5236550|allelePos=501|len=1001|taxid=9606|alleles='A/T'|mol=Genomic
 ACCTATTTCA AGGCCACTTT CATTAAGAAA CTCTTTGGGA GAGTGAAATT GCTTTCCAAT
 TGCTCGTCTC AAATTCTAGG TCTTACTTAA CCTCAGCTTC GGAATCTTAA TTTTCCTGCC
 ACTAGGGTAT TCTGTTTCCT TAGTGAGTAG CCATTCTAAA GTTCCTTAGG AGAAGTCACT
 AAAGAAACAG TTAAAGGAgg ctgggagtgt tggctcacac ctgtaatccc agcactttgg
 gaggacgagg tgggcggatc acctgaggtc aggagtttga gaccagcctg accaacatgg
 tgaaaccctg tgtctactaa aaatacaaaa aagttagctg ggcgtggtgg cgggcgcctg
 taatcccaac tactcaggaa gctaaggcag gagaatcgct tgaacccggg aggtggaggt
 tgcaatgagc cgagatagtg ccattgcact ccagcctggg agacagagca agactccatc
 tccaaaaaaa gaaaaaaaaa
 W
 gaaaCAGTTA AAGGCAAAGG AAAAAAGGAT GTCAGAGAGT ATGTTTCATG TCAGTTGGGG
 AAATCAAGAC ATAAGCTGTg gctgagcgca gtggctcaca cctgtaatcc cagcacttta
 agaggccaag gcaggtgaat cgcttgagtc cagaagttcg agaccagcct gggcaacatg
 gtgaaactcc atctctacaa aaaaatgcaa agatgagcca gggatggtgg tgcatgccta
 tagtccctgg tactcgggag gatgaagcag gaggatcgtt tgagcccagg aggcagaggt
 tgctgtgaga gccaagatca cgccattgca caccagcctg ggtggcagag tgagaccctg
 tctcaaaaca aacaaacaaa caaacaaaca CAACATAAGC TGCTTTGTTC AATTCATGTT
 TAATTAATAA CATGGAATGT ATCTTATAGA AACACTCAGC ATGCAGTTGT TTGTAAAAGG
 GTGTTTATGG CAGAACCACT

  Submitted Frequency for ss5236550 back to top
There is no frequency submission for ss5236550.


  dbSNP summary of Genotypes for ss5236550 back to top
No sufficient data to compute Hardy-weinberg probability for ss5236550.


  Submitted individual genotype for ss5236550 back to top
There is no individual genotype data for ss5236550.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement