Submitter | Handle | SC_JCM | Submitter SNP ID | NT_004441.12_387436 | RefSNP(rs#) | rs1831238 | Submitted Batch ID | 02-JAN-2003 | Submitted Date | Jan 10, 2003 | Publication Cited | [1] SNPs detected by comparing TSC reads to NCBI build 30 Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Jan 10 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_004441.12
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| | Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | SEQUENCE:Q71P83FE12.0.SCFPOSITION:264QUALITY:44SEQUENCE:Q71P5FA4.0.SCFPOSITION:295QUALITY:51SEQUENCE:Q71P7FD9.0.SCFPOSITION:-304QUALITY:56SEQUENCE:Q71P132FH2.0.SCFPOSITION:286QUALITY:42SEQUENCE:S110P184FF11.T0.SCFPOSITION:-323QUALITY:29SEQUENCE:S156P6311542RD9.T0.SCFPOSITION:234QUALITY:42SEQUENCE:Q71P180FD1.0.SCFPOSITION:291QUALITY:56SEQUENCE:Q71P53FA8.0.SCFPOSITION:-304QUALITY:43SEQUENCE:Q71P25FB3.0.SCFPOSITION:297QUALITY:42 |
>gnl|dbSNP|ss5609973|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic CATCTGCCCC AGTGGGCCCC CAGTTTATTG CCCTTGCTTG TAGCTGGGAA GGTGATGGTG
TCACAGGAGG AAAAAGGAAA CAGAAGCCTG GTGGGCACCT TAGGAGGAGC CCTCAGGTAA
AATGTGGACT CCACAGAGGA GTCCGGTAGA GCTTCACTCA AGAGAATGAC TCCCATTTAC
CCACAGGATC CTTCCCTACC
R
TGCCTGGCCC AGCTACCTCC CTGCCAAGTC CACTCCATCC TGTGTCCTCC CCAGTTCTCC
TGAAGTGGGT CTCACCAGGC AGAGAAtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
tgtgtgtgtg tgtatgtTGG AGGATGAAGA GGAGGTGCAG GGCAAGATAA ACCCTAGCTG
CAGGGAAGGG GAGATGGACA
There is no frequency submission for ss5609973.
No sufficient data to compute Hardy-weinberg probability for ss5609973.
There is no individual genotype data for ss5609973.
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