>gnl|dbSNP|ss61705028|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic
TTTATAGCCA TAGTAGCCCT CTCTCCACCT CCCCTCACTT ATTCTATTTT TTTCTCCCTT
TTCTAAGACC AAAAGTGAAG TTAAGAAGGT GGAAGGGAGA AGGAAGACAT TTTACAAAAA
GGATACTCTT CTACTAAAAG ATAACCCCGC ACGGCATTTC ACACTTGCCT ACGTCACCCT
GCTTTCCACG CACCTCCTCA GAGGGAGGGG CTGTTATTGT TCCTGTTTTA TGAAAAAAGC
CGAGAGAGGC TACAGAACCT GTTTGATGTG ATAGCTAATT ATGGTCCGCG GAGCCTCAAA
CCGAGTCGGG CCTGTGACTC CGAGCTGCGC TGCCTCGTAT TGATTGTCAT GCCTTTCTCC
AAATACGCAC CAGATAAACT ATTGTATCTA TTCAGTATGA
Y
TGTTCTAACT CTGGCTTTGA GCTGTCGAGG TGGCTTCTAC CTTAGGTCTA GTTTTTGGAA
AGGTGAAGCA GGAGTGGAAG CTCTCTAAGG GATACGAAAT CTGATTTTAT CCAAAGAAAT
CACAGCAGCC TTTGAAAGAC ACATTCAGAT TTTCAAACAA ACAACAGACA ATTCAAAACC
AGGCGCTCTG CTTATTCACT GAAACCGTAA GCTGCTGAAA CTCAGGGAAA AGCTTAAGAA
ACTGGTCTTA AAGCTTCAGG CCAAACAATG CTTCAAATCA CATTTGAAGT AATCACTTAA
AAACAGTAGA AAAATCAGTT ATCAATTACC TAAAACACTT ATACCCAATA AAATATTCCC
ATGATGACAA GTGTCTGCTT CTTTCTAGAT GAGTGAAAGG
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 226 | 226 | T=0.54424781
| C=0.45575222 | C/T=0.48672566
T/T=0.30088496
C/C=0.21238938
| Pr(chiSq=0.040,df=1)
=1.000 | Genotype
Freq. |
HapMap-HCB
- EAST ASIA | 86 | 86 | C=0.56976742
| T=0.43023255 | C/T=0.62790698
C/C=0.25581396
T/T=0.11627907
| Pr(chiSq=3.389,df=1)
=0.100 | Genotype
Freq. |
| HapMap-JPT | 172 | 172 | T=0.55813956
| C=0.44186047 | C/T=0.53488374
T/T=0.29069766
C/C=0.17441860
| Pr(chiSq=0.613,df=1)
=0.439 | Genotype
Freq. |
| HapMap-YRI | 226 | 226 | T=0.59734511
| C=0.40265486 | C/T=0.45132744
T/T=0.37168142
C/C=0.17699115
| Pr(chiSq=0.431,df=1)
=0.527 | Genotype
Freq. |
| HAPMAP-ASW | 98 | 98 | T=0.67346936
| C=0.32653061 | C/T=0.57142860
T/T=0.38775510
C/C=0.04081633
| Pr(chiSq=4.388,df=1)
=0.050 | Genotype
Freq. |
| HAPMAP-CHB | 82 | 82 | C=0.57317072
| T=0.42682928 | C/T=0.51219511
C/C=0.31707317
T/T=0.17073171
| Pr(chiSq=0.090,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-CHD | 170 | 170 | C=0.60000002
| T=0.40000001 | C/T=0.49411765
C/C=0.35294119
T/T=0.15294118
| Pr(chiSq=0.074,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-GIH | 176 | 176 | T=0.71022725
| C=0.28977272 | T/T=0.53409094
C/T=0.35227272
C/C=0.11363637
| Pr(chiSq=1.829,df=1)
=0.200 | Genotype
Freq. |
| HAPMAP-LWK | 180 | 180 | T=0.64999998
| C=0.34999999 | C/T=0.45555556
T/T=0.42222223
C/C=0.12222222
| Pr(chiSq=0.000,df=1)
=1.000 | Genotype
Freq. |
| HAPMAP-MEX | 100 | 100 | T=0.58999997
| C=0.41000000 | C/T=0.54000002
T/T=0.31999999
C/C=0.14000000
| Pr(chiSq=0.675,df=1)
=0.439 | Genotype
Freq. |
| HAPMAP-MKK | 286 | 286 | T=0.62587410
| C=0.37412587 | C/T=0.48251748
T/T=0.38461539
C/C=0.13286713
| Pr(chiSq=0.132,df=1)
=0.752 | Genotype
Freq. |
| HAPMAP-TSI | 176 | 176 | T=0.65340906
| C=0.34659091 | T/T=0.45454547
C/T=0.39772728
C/C=0.14772727
| Pr(chiSq=1.307,df=1)
=0.254 | Genotype
Freq. |
