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Submitted SNP(ss) Details: ss6396331           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004321.13_1050318
RefSNP(rs#)rs4648344
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P8685FH8.T0position:249quality:42sequence:G248P8685FF11.T0position:250quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6396331|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 ACTTATCTAG ATAGTGCTCA TCCGGGATTC CCAGAGCTTC AGCAGGGGCT GCTTTCCCTC
 CTTGAATGTC TGAAGAGatt aaaacaattt aaataacttt ttatagaaat tattttcaaa
 attttaGTAA GCAGTTTGAT GTGAGCTCTA AAACGATTAT ACAAGTAAAA AGGTAGCATG
 TTTTCCATTC AGCTGGGAGA
 Y
 GGCTGAGGTG CAGCAGGCGT GCAGTGATAC TTGCTGAATG GACAGAAGCC GTTCCCACAT
 GGAGCTTCCA TGACATGCAT TTACACACCC CGATTCTTTA CACACCCCAG TTCTTTGTGC
 ACCCCAATTC TTTACATACC CTGATTCTTT GGCTTCACAG CATCACTTTC TTTTTCCTAA
 GACACAGAAA CAGTGAGGTC

  Submitted Frequency for ss6396331 back to top
There is no frequency submission for ss6396331.


  dbSNP summary of Genotypes for ss6396331 back to top
No sufficient data to compute Hardy-weinberg probability for ss6396331.


  Submitted individual genotype for ss6396331 back to top
There is no individual genotype data for ss6396331.