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Submitted SNP(ss) Details: ss6396332           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004321.13_1050337
RefSNP(rs#)rs4648345
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P8685FH8.T0position:230quality:51sequence:G248P8685FF11.T0position:231quality:41

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6396332|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 ATCCGGGATT CCCAGAGCTT CAGCAGGGGC TGCTTTCCCT CCTTGAATGT CTGAAGAGat
 taaaacaatt taaataactt tttatagaaa ttattttcaa aattttaGTA AGCAGTTTGA
 TGTGAGCTCT AAAACGATTA TACAAGTAAA AAGGTAGCAT GTTTTCCATT CAGCTGGGAG
 ATGGCTGAGG TGCAGCAGGC
 R
 TGCAGTGATA CTTGCTGAAT GGACAGAAGC CGTTCCCACA TGGAGCTTCC ATGACATGCA
 TTTACACACC CCGATTCTTT ACACACCCCA GTTCTTTGTG CACCCCAATT CTTTACATAC
 CCTGATTCTT TGGCTTCACA GCATCACTTT CTTTTTCCTA AGACACAGAA ACAGTGAGGT
 CAGGGGCAAA GGGCTGCAGT

  Submitted Frequency for ss6396332 back to top
There is no frequency submission for ss6396332.


  dbSNP summary of Genotypes for ss6396332 back to top
No sufficient data to compute Hardy-weinberg probability for ss6396332.


  Submitted individual genotype for ss6396332 back to top
There is no individual genotype data for ss6396332.