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Submitted SNP(ss) Details: ss6396350           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004321.13_299809
RefSNP(rs#)rs2981889
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P87989FH2.T0position:142quality:34

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6396350|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CGTCTGCACT GACTCTGCTG GATGAAGGGA GGGTGTGGGA TACGTGCTCC CTGTCCGGCT
 GGTGGGGACC TGGGGCTCTC AGAGGATCTG TTGGGGCGGG GAGATGAGGG AAGAGTTTGC
 TTTTCCTGCT TCTGAGATGT GTTCTGAGGA AGCTGAGTTG TGCCACTGAA GCCCTTGCTA
 GTGGCCGCCG GCTGGTCCCC
 Y
 GCGTGGAGTG GCTCAGGGAA AGCGTCAGGG CATGCAGGAG CAGGGACACA TGGGCTCAGC
 CTCTGTCTGC TCTCAGCGTC CCCGGGCAGA AGCACTGGAG CCTGGGGCTT CTCCGAGGGT
 GTCTGTCTCC TTCCTCGCCC ACAGGTAGTG CCAGGGGGCA TTAACAGGAA GGAAAGGGCT
 CAGGAGGCTT AGCTGGAGGC

  Submitted Frequency for ss6396350 back to top
There is no frequency submission for ss6396350.


  dbSNP summary of Genotypes for ss6396350 back to top
No sufficient data to compute Hardy-weinberg probability for ss6396350.


  Submitted individual genotype for ss6396350 back to top
There is no individual genotype data for ss6396350.