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Submitted SNP(ss) Details: ss6396352           
Submitter
HandleWI_SSAHASNP
Submitter SNP IDNT_004321.13_301111
RefSNP(rs#)rs4648359
Submitted Batch ID11-FEB-2003
Submitted DateFeb 12, 2003
Publication Cited[1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 12 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodWIBR_FOSMID_END_SNPS
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:G248P83568RC10.T0position:237quality:43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss6396352|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 GAATTTGGGG TCCTGGAGCC AGGCTGGGGT GCTTTACAAT GTCTCCTCCA ATCAGCCAGG
 CAGTCAGATG GGGAGTTTTG TTTTTATCTC CTTGGCCTGT TTGGGAAGCT GATTGGTCAG
 TCCTCAGCCT CAGCCTTTGT GGGTGTTGTG CAGGGTGGGT GTGCAGGCTG CAGGTGCTCA
 CAGGCCAGGC CCCGTGCGTG
 S
 ACCACCAGCA CTGTATCGTT GCTGTAGGCA GGGCCCGGGC CACATCATAA AGCCAAACCA
 CACTGGGGTC TCCCCTAGCC TGCAGCAGGA GAACCACTTT GACCCCTGCC TTAGAGCTCA
 GCCCTGAAAT AAAACATGAA ATGATTGTTA GCTGCTCATT TCAAACTAGG AGGCACAGGT
 GCCAGAATCT GTTCTGGCCC

  Submitted Frequency for ss6396352 back to top
There is no frequency submission for ss6396352.


  dbSNP summary of Genotypes for ss6396352 back to top
No sufficient data to compute Hardy-weinberg probability for ss6396352.


  Submitted individual genotype for ss6396352 back to top
There is no individual genotype data for ss6396352.

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