Submitted SNP(ss) Details: ss640377

Submitted SNP(ss) Details: ss640377

Submitter
Handle	SC_JCM
Submitter SNP ID	AC068479.2_139631
RefSNP(rs#)	rs471035
Submitted Batch ID	19-JUL-2000b
Submitted Date	Jul 27, 2000
Publication Cited	[1] Clone overlap SNPs detected from the public human 06-July-2000 draft sequence
First entry to dbSNP	Jul 27 2000 12:00:00:000AM

Resource Links
GenBank Accession	AC068479 AC017068
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	Overlap_SNPs_by_SsahaSNP
Ascertainment Samplesize	2
Population	N.D.

Allele
Observed Allele	G/A
Ancestral Allele
Allele Origin	N/A
SNP Class	SNV
CpG Code	c_g/a

Validation
Validation Status	Not Validated
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 2
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Comment
seqversion:AC068479.2position:139631unfin_quality:59seqversion:AC017068.3position:154281unfin_quality:90

Fasta sequence (Legend)

 GGAACAACGT CCAGAGGACT AGTGATGTGC TACGCTGCCA GTATCCACTC TAGGAGGGGC
 TCAGCTGGGT AACCCGGGCT AGGAAGATGT CCCCAGAGTG GTACATCCCA GCTCCTGGGG
 CCAGGCCCGG GACTGGAGTT CCTGAGATTT TGAATTTGTT TCCTTCAGAT GGGAGCAGCT
 GGCACCCAAG AAATACATAC
 R
 AAAATAACGA TTTAGTTATG CAGAAATGTT TATAGTATTA AGATTTTTGT GCAAGTTGTA
 TTCATGCAGG TGTGATAAGT TTTGAAATCC TCAGCTGTGC TTTGCATGCT TTATCAGCCT
 TTACAATATA TAAAACATTT TTTAAAATTT GAGGTCATCT GCGATGGCTC ACACTTGTAA
 TCCTAACACT TTGAGAGGCC

Submitted Frequency for ss640377

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
SC_12_C - NORTH AMERICA	22	G=1.00000000					TSC-SANGER-SC_12_C-Sep-21-2003-ALLELE_FREQUENCY	TSC-CSHL
SC_12_AA - NORTH AMERICA	18	G=1.00000000					TSC-SANGER-SC_12_AA-Sep-21-2003-ALLELE_FREQUENCY	TSC-CSHL

dbSNP summary of Genotypes for ss640377

No sufficient data to compute Hardy-weinberg probability for ss640377.

Submitted individual genotype for ss640377

There is no individual genotype data for ss640377.

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