NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss640431           
Submitter
HandleSC_JCM
Submitter SNP IDAL354811.6_95643
RefSNP(rs#)rs471089
Submitted Batch ID19-JUL-2000b
Submitted DateJul 27, 2000
Publication Cited[1] Clone overlap SNPs detected from the public human 06-July-2000 draft sequence
First entry to dbSNPJul 27 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlap_SNPs_by_SsahaSNP
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG Codec/t_g
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
seqversion:AL354811.6position:95643unfin_quality:99seqversion:AC016150.9position:-146629unfin_quality:31seqversion:AL353757.1position:-23712unfin_quality:43

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss640431|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 Cagctttggg gttggtttgc tcgtgattct ctaattcttc catttgtgat gttaggttgg
 tagtttgagg cctttctaac tttttgattt gaggatttag tgctatgaat ttcccttgta
 acactgcctc agctgtgtcc cagagattct ggtacgtagt atctttgttt caaagaactt
 ctttatttct gccttaattt
 Y
 gttatttatc caaatgtcat ttaggagtat gatgtttaat ttccatgtaa ttgcatggtt
 ttgagtgata tttttagtat tgatttctat tttcattgtg ttgttgtctg aaagtatgtt
 tggtatgatt ttcattcttt tgcatttgtt gagggttgtt ttatgtatga ttatgtggtc
 aattttagag tatgtgCCAT

  Submitted Frequency for ss640431 back to top
There is no frequency submission for ss640431.


  dbSNP summary of Genotypes for ss640431 back to top
No sufficient data to compute Hardy-weinberg probability for ss640431.


  Submitted individual genotype for ss640431 back to top
There is no individual genotype data for ss640431.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement