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Submitted SNP(ss) Details: ss65824222           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS5
RefSNP(rs#)rs1654
Submitted Batch IDKHB2006_1
Submitted DateOct 17, 2006
Publication Cited16702437
First entry to dbSNPOct 17 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFP-TDI
Ascertainment Samplesize178
PopulationKHP1
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss65824222|allelePos=301|len=347|taxid=9606|alleles='G/C'|mol=Genomic
 GGGAACATCT TGAGAAACTA ATTTTTAAAT ACTGTGCCCT CCTCTATCAC TCTTGCCCCA
 GCCAGAAGCA CAAATTCTTA CGTATGAATA AGAAGAACAA GGCCATGGGT TTTTGTTTGG
 TTTTATTTTA ACATGAAGGG TAGTATTAAG TCTAAGCAAG AACACTGGGC CTGCACCAAA
 ATAAACAAAC ACACAGTGAT TTTTTTTTTT TCTTAGCACA GAGGCAGCCA GTATTACACA
 GCCCCTCTCT GTGTTGTGAC CCTAGCTTGC TGCTTCTGGC TGTGCCAAAT GCTAAGCAGG
 S
 GTTTCACTCA GGGCAGCCCG GGAGGCAAGG TCTGAGAGTG GAAGCT

  Submitted Frequency for ss65824222 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
178C=0.84269702
G=0.15730301
C/C=0.70786500
C/G=0.26966301
G/G=0.02247200
KHB2006_1KRIBB_YJKIM


  dbSNP summary of Genotypes for ss65824222 back to top
No sufficient data to compute Hardy-weinberg probability for ss65824222.


  Submitted individual genotype for ss65824222 back to top
There is no individual genotype data for ss65824222.

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