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Submitted SNP(ss) Details: ss65824232           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS15
RefSNP(rs#)rs4373
Submitted Batch IDKHB2006_1
Submitted DateOct 17, 2006
Publication Cited16702437
First entry to dbSNPOct 17 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodFP-TDI
Ascertainment Samplesize174
PopulationKHP1
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss65824232|allelePos=301|len=601|taxid=9606|alleles='C/T'|mol=Genomic
 TTTGCTGTTG CTTGTAACTC ACCCCTCCTT CCACTGGGAG CCTCTCCCTG TATCCCCCCT
 GCCTCAAGGC CCACTGTGCC CTGCCTGCTC TGTCCATCAC CCTCGCTGTC TATGCAGCTT
 GGGACATGTC CCAAGCACCT GCTCCTCCTG CAATGCTGTT CCTGCTGTTT CTGGGACCGG
 CTTTTTGCCC TCAGGCTCCT GAGCTATTGT AGGTTCTAGA AGCCTCTGCT GACCTTCTCA
 GGCACTCCTC TGCTCAAGAA CCTGCTGTGT CTCCCTAGCA CGTGTTCCTC AAGTCTGAAT
 Y
 ATTCCACTCC CGTAACACTC TGCTATTCTT CAACAGGCAT ACTCTACCAC CTCCCGCTGG
 GCCCAGGCCT TCCCCTTGGC ACAGTTGGAG CAGCCTCTGT TATGGTATGT GCCTGTCTCA
 CGCTAGGGGC CAGGGCTGGG CTCAGACCCT GGCGGCTGAC TCCCCATGTT GTGCTTAAAC
 GTTCGTCTCA ATTTTGAACA TTTCTCCCAA CACTTTTTAA ATAAAATCCC TGAGCTCTTC
 TGCTTGGAGA AAGTCCTGGC AAATCATTCC CAACAATAAA ATCTCATGAT CAGAATGTAG

  Submitted Frequency for ss65824232 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
174T=0.73563200
C=0.26436800
T/T=0.55172402
C/T=0.36781600
C/C=0.08046000
KHB2006_1KRIBB_YJKIM


  dbSNP summary of Genotypes for ss65824232 back to top
No sufficient data to compute Hardy-weinberg probability for ss65824232.


  Submitted individual genotype for ss65824232 back to top
There is no individual genotype data for ss65824232.

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