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Submitted SNP(ss) Details: ss66036183           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1780274
RefSNP(rs#)rs6088791
Submitted Batch IDMapping250K_StyTEST
Submitted DateMay 10, 2010
Publication CitedN.D.
First entry to dbSNPMay 10 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66036183|allelePos=17|len=33|taxid=9606|alleles='A/G'|mol=Genomic
 GGATAAAGAA GAGAAG
 R
 ATTCCTGGCA GCAGTA

  Submitted Frequency for ss66036183 back to top
There is no frequency submission for ss66036183.


  dbSNP summary of Genotypes for ss66036183 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118A=0.63559324
G=0.36440679A/G=0.45762712
A/A=0.40677965
G/G=0.13559322
Pr(chiSq=0.009,df=1)
=1.000
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090A=0.75555557
G=0.24444444A/A=0.57777780
A/G=0.35555556
G/G=0.06666667
Pr(chiSq=0.063,df=1)
=1.000
Genotype
Freq.
HapMap-JPT9090A=0.73333335
G=0.26666668A/A=0.51111114
A/G=0.44444445
G/G=0.04444445
Pr(chiSq=0.837,df=1)
=0.371
Genotype
Freq.
HapMap-YRI120120G=0.76666665
A=0.23333333G/G=0.58333331
A/G=0.36666667
A/A=0.05000000
Pr(chiSq=0.037,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss66036183 back to top
There is no individual genotype data for ss66036183.

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