NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss66036184           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1780277
RefSNP(rs#)rs11180435
Submitted Batch IDMapping250K_StyTEST
Submitted DateMay 10, 2010
Publication CitedN.D.
First entry to dbSNPMay 10 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66036184|allelePos=17|len=33|taxid=9606|alleles='C/T'|mol=Genomic
 GGATAAAGAC TCTTAA
 Y
 CTATGGACAA AGCAAG

  Submitted Frequency for ss66036184 back to top
There is no frequency submission for ss66036184.


  dbSNP summary of Genotypes for ss66036184 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
HapMap-CEU118118C=0.56779659
T=0.43220338C/T=0.52542371
C/C=0.30508474
T/T=0.16949153
Pr(chiSq=0.293,df=1)
=0.655		Genotype
Freq.
HapMap-HCB
- EAST ASIA 		9090C=0.50000000C/T=0.51111114
T/T=0.24444444
C/C=0.24444444
Pr(chiSq=0.022,df=1)
=1.000		Genotype
Freq.
HapMap-JPT9090C=0.51111114
T=0.48888889C/T=0.40000001
C/C=0.31111112
T/T=0.28888890
Pr(chiSq=1.793,df=1)
=0.200		Genotype
Freq.

  Submitted individual genotype for ss66036184 back to top
There is no individual genotype data for ss66036184.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement