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Submitted SNP(ss) Details: ss66036204           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1780345
RefSNP(rs#)rs7921545
Submitted Batch IDMapping250K_StyTEST
Submitted DateMay 10, 2010
Publication CitedN.D.
First entry to dbSNPMay 10 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66036204|allelePos=17|len=33|taxid=9606|alleles='A/C'|mol=Genomic
 GGATAAGGTA TGACAT
 M
 AGTAGAACGT GTCATC

  Submitted Frequency for ss66036204 back to top
There is no frequency submission for ss66036204.


  dbSNP summary of Genotypes for ss66036204 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118C=0.58474576
A=0.41525424A/C=0.42372882
C/C=0.37288135
A/A=0.20338982
Pr(chiSq=0.959,df=1)
=0.343
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090C=0.74444443
A=0.25555557C/C=0.55555558
A/C=0.37777779
A/A=0.06666667
Pr(chiSq=0.002,df=1)
=1.000
Genotype
Freq.
HapMap-JPT9090C=0.71111113
A=0.28888890C/C=0.48888889
A/C=0.44444445
A/A=0.06666667
Pr(chiSq=0.301,df=1)
=0.584
Genotype
Freq.
HapMap-YRI120120A=0.76666665
C=0.23333333A/A=0.56666666
A/C=0.40000001
C/C=0.03333334
Pr(chiSq=0.836,df=1)
=0.371
Genotype
Freq.

  Submitted individual genotype for ss66036204 back to top
There is no individual genotype data for ss66036204.

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