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Submitted SNP(ss) Details: ss66037660           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1784431
RefSNP(rs#)rs16831558
Submitted Batch IDMapping250K_Sty
Submitted DateOct 27, 2006
Publication CitedN.D.
First entry to dbSNPOct 27 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66037660|allelePos=17|len=33|taxid=9606|alleles='A/G'|mol=Genomic
 GGCCCTCTTC TGTGCC
 R
 ATTTCACACA CATTAA

  Submitted Frequency for ss66037660 back to top
There is no frequency submission for ss66037660.


  dbSNP summary of Genotypes for ss66037660 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118G=0.84745765
A=0.15254237G/G=0.69491524
A/G=0.30508474
Pr(chiSq=0.539,df=1)
=0.479
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090G=0.71111113
A=0.28888890G/G=0.51111114
A/G=0.40000001
A/A=0.08888889
Pr(chiSq=0.031,df=1)
=1.000
Genotype
Freq.
HapMap-JPT9090G=0.66666669
A=0.33333334A/G=0.53333336
G/G=0.40000001
A/A=0.06666667
Pr(chiSq=1.800,df=1)
=0.200
Genotype
Freq.
HapMap-YRI120120G=0.71666664
A=0.28333333G/G=0.55000001
A/G=0.33333334
A/A=0.11666667
Pr(chiSq=1.927,df=1)
=0.200
Genotype
Freq.

  Submitted individual genotype for ss66037660 back to top
There is no individual genotype data for ss66037660.

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