| Submitter | | Handle | AFFY | | Submitter SNP ID | SNP_A-1780287 | | RefSNP(rs#) | rs2342723 | | Submitted Batch ID | Mapping250K_Nsp | | Submitted Date | Oct 29, 2006 | | Publication Cited | N.D. | | First entry to dbSNP | Oct 29 2006 12:00:00:000AM |
| | Resource Links | | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | SNP_A-1780287 |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | GENECHIP | | Ascertainment Samplesize | 270 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | N.D. |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 4 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
>gnl|dbSNP|ss66274490|allelePos=17|len=33|taxid=9606|alleles='C/T'|mol=Genomic GAATGAGGTA CTGAAA
Y
AGGCTACACC ATGAAT
There is no frequency submission for ss66274490.
Population ID
-Class | Total
Sample
(2N) | Founder
(2N) | Major
Allele
Freq. | Minor
Allele
Freq. | Genotype
Freq. | HWE Goodness of Fit | Data
Source | | HapMap-CEU | 118 | 118 | C=0.95762712
| T=0.04237288 | C/C=0.91525424
C/T=0.08474576
| Pr(chiSq=0.010,df=1)
=1.000 | Genotype
Freq. | HapMap-HCB
- EAST ASIA | 90 | 90 | C=0.85555553
| T=0.14444445 | C/C=0.71111113
C/T=0.28888890
| Pr(chiSq=0.344,df=1)
=0.584 | Genotype
Freq. | | HapMap-JPT | 90 | 90 | C=0.83333331
| T=0.16666667 | C/C=0.71111113
C/T=0.24444444
T/T=0.04444445
| Pr(chiSq=0.648,df=1)
=0.439 | Genotype
Freq. | | HapMap-YRI | 120 | 120 | C=0.65833336
| T=0.34166667 | C/T=0.48333332
C/C=0.41666666
T/T=0.10000000
| Pr(chiSq=0.332,df=1)
=0.584 | Genotype
Freq. |
There is no individual genotype data for ss66274490.
|
