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Submitted SNP(ss) Details: ss66274503           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1780316
RefSNP(rs#)rs10758070
Submitted Batch IDMapping250K_Nsp
Submitted DateOct 29, 2006
Publication CitedN.D.
First entry to dbSNPOct 29 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66274503|allelePos=17|len=33|taxid=9606|alleles='C/T'|mol=Genomic
 GGATAACTCA GATGCC
 Y
 GGCACTGGTA ACAATA

  Submitted Frequency for ss66274503 back to top
There is no frequency submission for ss66274503.


  dbSNP summary of Genotypes for ss66274503 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118T=0.80508476
C=0.19491525T/T=0.62711865
C/T=0.35593221
C/C=0.01694915
Pr(chiSq=1.061,df=1)
=0.317
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090T=0.51111114
C=0.48888889C/T=0.53333336
T/T=0.24444444
C/C=0.22222222
Pr(chiSq=0.203,df=1)
=0.655
Genotype
Freq.
HapMap-JPT9090T=0.63333333
C=0.36666667C/T=0.42222223
T/T=0.42222223
C/C=0.15555556
Pr(chiSq=0.372,df=1)
=0.584
Genotype
Freq.
HapMap-YRI120120T=0.67500001
C=0.32499999C/T=0.51666665
T/T=0.41666666
C/C=0.06666667
Pr(chiSq=1.892,df=1)
=0.200
Genotype
Freq.

  Submitted individual genotype for ss66274503 back to top
There is no individual genotype data for ss66274503.

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