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Submitted SNP(ss) Details: ss66274506           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1780321
RefSNP(rs#)rs9653179
Submitted Batch IDMapping250K_Nsp
Submitted DateOct 29, 2006
Publication CitedN.D.
First entry to dbSNPOct 29 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66274506|allelePos=17|len=33|taxid=9606|alleles='A/G'|mol=Genomic
 GGATAAGAAA GGTGGC
 R
 GAATAATAAT TTCTCT

  Submitted Frequency for ss66274506 back to top
There is no frequency submission for ss66274506.


  dbSNP summary of Genotypes for ss66274506 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118A=0.72033900
G=0.27966103A/A=0.52542371
A/G=0.38983050
G/G=0.08474576
Pr(chiSq=0.062,df=1)
=1.000
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090A=0.54444444
G=0.45555556A/G=0.51111114
A/A=0.28888890
G/G=0.20000000
Pr(chiSq=0.041,df=1)
=1.000
Genotype
Freq.
HapMap-JPT9090G=0.61111110
A=0.38888890A/G=0.42222223
G/G=0.40000001
A/A=0.17777778
Pr(chiSq=0.561,df=1)
=0.479
Genotype
Freq.
HapMap-YRI120120A=0.85833335
G=0.14166667A/A=0.73333335
A/G=0.25000000
G/G=0.01666667
Pr(chiSq=0.047,df=1)
=1.000
Genotype
Freq.

  Submitted individual genotype for ss66274506 back to top
There is no individual genotype data for ss66274506.

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