NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss66274508           
Submitter
HandleAFFY
Submitter SNP IDSNP_A-1780329
RefSNP(rs#)rs324197
Submitted Batch IDMapping250K_Nsp
Submitted DateOct 29, 2006
Publication CitedN.D.
First entry to dbSNPOct 29 2006 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGENECHIP
Ascertainment Samplesize270
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss66274508|allelePos=17|len=33|taxid=9606|alleles='A/G'|mol=Genomic
 GGATAAGAGA TGAGAG
 R
 AAAAGTAGAC TTACTG

  Submitted Frequency for ss66274508 back to top
There is no frequency submission for ss66274508.


  dbSNP summary of Genotypes for ss66274508 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
HapMap-CEU118118A=0.76271188
G=0.23728813A/A=0.57627118
A/G=0.37288135
G/G=0.05084746
Pr(chiSq=0.054,df=1)
=1.000
Genotype
Freq.
HapMap-HCB
EAST ASIA
9090A=0.87777776
G=0.12222222A/A=0.75555557
A/G=0.24444444
Pr(chiSq=0.200,df=1)
=0.655
Genotype
Freq.
HapMap-YRI120120A=0.60833335
G=0.39166668A/G=0.55000001
A/A=0.33333334
G/G=0.11666667
Pr(chiSq=1.426,df=1)
=0.251
Genotype
Freq.

  Submitted individual genotype for ss66274508 back to top
There is no individual genotype data for ss66274508.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement