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Submitted SNP(ss) Details: ss78015488           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr20_4018627
RefSNP(rs#)rs56258620
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88780069 -646 55

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78015488|allelePos=501|len=1001|taxid=9606|alleles='A/C'|mol=Genomic
 TGGTTTTATA TATATAGGGA GGTGTGTGTT TGTGTGTGTG TGTGTATATA TATATGTGTA
 TATATATGTG TATATATATG TGTATATATA TGTATATATA TGTGTATATA TATGTGTGTG
 TATATATGTA TATATGTGTG TATATATGTA TATATGTGTA TATATGTATA TATATGTGTA
 TATATATGTG TATATATATG TATATATATG TGTGTATATA TATGTATATA TATGTGTGTA
 TATATATGTG TATATATATG TGTGTGTGTG TGTGTGTGTG TGTATATATA TATATATATA
 TATATATCAG TTTGCCCTTG CTGGATAACA AACCACCCCA GAACTTACTG GCTTAATGCA
 TTAACCATTT ATTATTTCTC TAGGCTTTTG CAATCAGATG CTGGGTTGGC TGGAAGCTGG
 CTGGTATAGC GTGGCCATGC AGCAGGCTAG TCTAGGCTTA GTCACATAGT GATTGCAGGG
 TTTCAGGAAA ACAAATGAAA
 M
 CATGCAAGAT CTTATAAGGT CTTTACTTGG AACTGACAGA CTGTCACTTC TGCCAAACTC
 TTTTGGTCAA ACAACTCTCA AAGCCAAGCC TCACTTGAAA GAGTTTGGGA AAAAGTTCTG
 ATTCTTTTGT TTGTTTGCTT TAGAGACAGG GTCTTGCTCT GTCACCCAGA CTGGAGTGCG
 GTGGCGTAAT CATAGCTCAC TACAGCCTCG AACTCCTGGG CTCAAGCAGT CCTCGCAGCT
 CAGCCTCCCG AGTAGCTGGG ACTACAGATG TGAGCCACAG CACCTGGCAA AGTTCTGCTT
 CTTGATGAGA GATGTTACTA AATCATATTG CAAAGGGAGG GGTGGAGAAT TGCGGCCATT
 TTTGCAATCA ATCTAACGCA ACACCCACTT GTGAAAGACA GAAACCTGGG TGACATCCTG
 AGTCCTTCCT CCCACTTCTC CGACATCCGT TACCTCACCA AGCCAATTTG ATTTTCACCC
 CCCAAAACGC CATTCAACTT

  Submitted Frequency for ss78015488 back to top
There is no frequency submission for ss78015488.


  dbSNP summary of Genotypes for ss78015488 back to top
No sufficient data to compute Hardy-weinberg probability for ss78015488.


  Submitted individual genotype for ss78015488 back to top
There is no individual genotype data for ss78015488.

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