NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss78015491           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr11_111818740
RefSNP(rs#)rs11214207
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88526737 443 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78015491|allelePos=201|len=701|taxid=9606|alleles='G/A'|mol=Genomic
 AACTCCTAAT CCCCCTCAAC TGCACATGTT CATATTTCCT CTCATCTGAA CGTTTTGCCT
 CATAAAATTT GGGTGGTGCC ACTTTATCAA AAATTTAATT CTAACTTTGG GGAATGTCAT
 TTTATGAAAA TTTTAATTCT AACTTAGAAA AACCTCATAA ACTTGTAACA ATGTTTTATA
 AAGACAGTAT ACTTATTCAC
 R
 TATTTATCTT TTTTTGCCTT CTTGGTCTCA GACCATCTTT CTAGGGTTAT TTTTCTTTTT
 CTTTTTCTTA CTTATAATTG TGGTAAAATA CATATAACAT AAAATTTACT ACCTTAACCA
 TTTTTAAGTA TGCAGTCGGC TAAAATTTGT TGTAATGTCC CTTCTTTAAC TTCTAGTTTT
 GAGTCCACTC TCTTTTTTTG GTCGATGTAG CTAAAGTTTT TCCAATTTAA AAAAATCTTT
 CCAAAGAACC AGCTCTTGAT TTCATTGATT TTTTCTATTT TTTTTCTATT TTCTATTTTG
 TCTATCTGCC CTAATCTTTA TTATTTCCTT CCTTCTGCTA ACTTTGGATT TAGTTTGCTC
 TTTTTCTCTT TCCTTAATGT GTAAAGTTAA GTTGTTGATT TGAAGTCTTT TTTCTTTTTT
 AATATTCACT TTTACAGCTA TAATTTTCCC CCTTAGCATT GATTTTGCTG CATCCTACAT
 ATTTTCATAT GTTGTGTTTT

  Submitted Frequency for ss78015491 back to top
There is no frequency submission for ss78015491.


  dbSNP summary of Genotypes for ss78015491 back to top
No sufficient data to compute Hardy-weinberg probability for ss78015491.


  Submitted individual genotype for ss78015491 back to top
There is no individual genotype data for ss78015491.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement