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Submitted SNP(ss) Details: ss78015502           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr8_11672978
RefSNP(rs#)rs4840581
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88949686 -178 59

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78015502|allelePos=501|len=708|taxid=9606|alleles='T/C'|mol=Genomic
 CAATCACCTT TCTACTTTCT GTCTCGATGA ATTTTACTTC CCCAGATACC TCATATCAGT
 GGAATTATAC AGTATTTGGA GTTTTTTTGA CTGGCTTATT TCACTTAGTA TAAAGTCCTC
 AAAGTTCACC CATGTTATAG ATAAGGGAAG ATTGGAGATT GTTGTAATCT AATTTTGCTG
 CTATTACAGA ATATTTGAGA CTGCATAATT TATAAGCAAT GTAAGTCTAT TTAGCTCACA
 GTTCTGGAGC CTGGAAAGTC CAAGGGCATG GCATTGGCAT CTTGCCGTGT CATTTGCAAT
 TGGCATTATT CCATTCAGGA GGCCAGAGCT CTATGGCCTA ATCTCAAAGT TGCCATCTCT
 TACCACTGTT CCATTGGGGA TTAAGTTTCC AACACATACT TTTTGAGGAA CACATTGAAA
 GCATTGCAGA GCCTTATTCA TCTGTTTGCC CTTGGAGCCT AGCACACTGC CAGGCACATT
 GAATAAGCTT AATTAATGAT
 Y
 AGTGAATTGA AGTGGCTGCA GTGTCACAGG AACCCAAAAG AGGGACAGCA GAAATTGCCA
 TAGTTGGTAT GAGGACATCC TGACCTAGAC ATTTTTGACC TAGTAAATGT TTTGTTCATG
 ATGGGCATTT GACAGTTATT TTCATCAGAA TTATATCAAC ATTGGTGAGT TTATACCAAG
 AAATATTTTC TGCAGCAAAT TCTATTA

  Submitted Frequency for ss78015502 back to top
There is no frequency submission for ss78015502.


  dbSNP summary of Genotypes for ss78015502 back to top
No sufficient data to compute Hardy-weinberg probability for ss78015502.


  Submitted individual genotype for ss78015502 back to top
There is no individual genotype data for ss78015502.

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