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Submitted SNP(ss) Details: ss78015508           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr2_54370046
RefSNP(rs#)rs56042969
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality88038579 -578 3387975481 -576 51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78015508|allelePos=501|len=919|taxid=9606|alleles='C/G'|mol=Genomic
 ATTTAAAGCC TGGAAGCCCC GCTTTGAGTT GTCCCACCTT TCTAAATCAA ACCAATGTAT
 TTCTTTCTTT TCTTTTTTTT TTTTTTTTTT GAGTCAAAGT CTTGCTCTTG TCCCCCAGGC
 TGGAGTGCAA TGGCACAATC TCGGCTCACT GCAACCTCTG CCTCCCGGAT TCAAGCGATT
 CTCTTGCCTC AGCCTCCCGA GTAGCTGGGA TTACAGGCGC CTGCCACCAC GCCCAGCTAA
 TTTTTGTATT TTTAGTAGAG ACGGGGTTTC ACCATGTTGA CCAGGCTGGT CTTAAACTCC
 TGACCTCAGG TGATCTGCCT GCCTCGGCCT CCCAAAGTGC TGGGATTACA AATGTGGAGC
 CACCGCGCCC GGCCAAACCA ATGTGTTTCT TAAATGTATT TGATTAATGT CTCATGCCTT
 CCTAAAATAC ATGACAACAA GCTGTACCCT GACCACCTTG GGCACACGTT CTCAGGACCT
 CCTGAGAGCT GTGTCACAGG
 S
 TGTGGTCACT CATATTTGGC TCAGAATAAA TCTCTTAAAA TATTTTACAG AGTTTGACTC
 TTTTCGTCAA TATTATGAAA TGTGTCTGAG ATACATATAC AAAAGAAAAA TACTAAGATA
 TAGCATGCAT CCAAGAAATG CAGTATCTTT CTGTTAACAT AAATTATCTA AATTCATATA
 ATTCATGTGC ATTTCTGAGT CTCATCTCAC ATCAGACAGG CAGCCTGAGA TGAAGAATGA
 GCACGGGCTC AGGTTGGGAC CTGGTAAAAG CAGGCATCAC CATTTAAGGA GCAGAGACCT
 CTGCTAGGTT GTTTCACCTC TCTGAGTTTG TTTCCTCATG TATCAGTTGG GAATGATATC
 GAATTTGTAT CATCCTTATG AAAAAACAAA TATATATGAA GTTGCAAATA TAGGTTTT

  Submitted Frequency for ss78015508 back to top
There is no frequency submission for ss78015508.


  dbSNP summary of Genotypes for ss78015508 back to top
No sufficient data to compute Hardy-weinberg probability for ss78015508.


  Submitted individual genotype for ss78015508 back to top
There is no individual genotype data for ss78015508.

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