NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss79688328           
Submitter
HandleHGSV
Submitter SNP IDCor18507_SNV_20070510.chr8_51437634
RefSNP(rs#)rs11993995
Submitted Batch IDNA18507-Fosmids-20070510ac
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodNA18507-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality63195868 726 2966806836 433 68

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss79688328|allelePos=201|len=526|taxid=9606|alleles='T/C'|mol=Genomic
 ATACACAAAA CAAAACAGTG AAATTATGTT CAATAAACTA ACGCTGTAGC TTTGACCTGG
 AAAATGAATT TTTTGAGGAG TAAGTCTTCT AATGAGGGAA GGGAGAAGTA TTGGACACTT
 CAAAGAATAC TTCTTTAATA TCTAAAGTTG ATTTTCCTCT CATCCACTTG TAACATGCTT
 CATTATAAAG ATAGTCTTTT
 Y
 TTTTTACTAA AAATATATAG GAATGATTTA GCACTCTAAT TTTCTTCAGA TGAGCAAACT
 AAATCCCTTT AAAATTATTC CACCAAGATC ACATAGATAT TAAGTAGTCA CTGTAAGGCT
 AGAATTTAGT ATTCTCTTTC CCTGGTTATT TTTACTATAT GGAAGCTACT TATGTTTATT
 AGGATTTTAG GTTAGAGTCT TATGTATAGC AGGTGATAAT TTATATCAGG TGCTATGCTT
 TGTTATATAT GGTGAGTTTT ATGGGAAGTA TACTTTACTC TGGGTGTTAA ATAAGGCTTC
 ACAAAGACAC ATAAGATTGA TATAA

  Submitted Frequency for ss79688328 back to top
There is no frequency submission for ss79688328.


  dbSNP summary of Genotypes for ss79688328 back to top
No sufficient data to compute Hardy-weinberg probability for ss79688328.


  Submitted individual genotype for ss79688328 back to top
There is no individual genotype data for ss79688328.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement