NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss79688366           
Submitter
HandleHGSV
Submitter SNP IDCor18507_SNV_20070510.chr4_44457651
RefSNP(rs#)rs1439365
Submitted Batch IDNA18507-Fosmids-20070510ac
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality66114313 116 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss79688366|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 ACACCCAAAA ATGAGGCAGA AGCCTCGTTT TGGCAGCTCT GGGTCACTTA GGAGTTTTTC
 ACAACCAAAG GGCTACTAAT TCTGAAGCCT TATAAAGCTG TGTGCTGGAA CCAGGATGGT
 TCTGAAGACA TTTTAAAATA TTCTGGATGA GTTCATTCTG CTCAAGTTAA GAGGAATTTT
 CTCAAGATTA GTTCAAGTTG
 Y
 GACTGAAAGC AAAGATTAGT AAATAGAACT TCTCATTATT TAAACATAAT AATCCATGAA
 AATATAATGT TTAAGCCAAT ACTAATGGCT ATTTAAAGGA TTTATTTTAT CCAAGTTTAT
 GAATGATGAG AGGTTTTTAA AAAAGGAATT TTGATGAAAG GAATTTAACT TGGGAAATCT
 TGCTAGAAGT TGATTTCTAA

  Submitted Frequency for ss79688366 back to top
There is no frequency submission for ss79688366.


  dbSNP summary of Genotypes for ss79688366 back to top
No sufficient data to compute Hardy-weinberg probability for ss79688366.


  Submitted individual genotype for ss79688366 back to top
There is no individual genotype data for ss79688366.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement