NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss79688370           
Submitter
HandleHGSV
Submitter SNP IDCor18507_SNV_20070510.chr5_43040997
RefSNP(rs#)rs58237022
Submitted Batch IDNA18507-Fosmids-20070510ac
Submitted DateNov 23, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPNov 23 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA18507-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality65150551 -179 6161615466 -118 61

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss79688370|allelePos=201|len=592|taxid=9606|alleles='C/G'|mol=Genomic
 CCTTTAAAGG CTTTCCCACA TGGAAAGAAT GGTGACAGAC AAAACTTAAA GAGAGAAGAC
 TTTCTAACAA TAAGAAAACA ATAATCACAA TACATAGCCT TATCATAGTT CAGGGCAGGA
 TCTCCTTGCA AATGAGTATA GAGACAAAAT TTATACTCTA TTAAAAAAAT CCAAAACATT
 ACCTTTCAAA ACTCTAGGAA
 S
 TTCCAAGTTG TTAATAAGGA AACTTATTAT GGGACTCTAT TCGATACTTC CACTTTCAAA
 TAATTACAGA AATATTTGAA ACTACTTCCC CTCCCCAATG ATGAAGTATT ACTCTCCAAA
 TTTGGGGGAA GTAAAGATTT TTTTAAAAAT TCCTGGCACC CTCTAAACTT TCTTCTTTCT
 TGCCTTTCTC AGATACTTTT TTTTTAGACA GGGCCTCGTT CTGTCACCCA GACTGGAGTG
 CAGTGGTGCA ATCTCGGCTC ACCGCAACCT ACCTCCACCT CCCAGGCTCA AGTGATTCTC
 CTGACTCAGT CTCCCGAGTA GTTGAAATTA CAGGCAAGCG CCGCCACGCC TGGCTAATTT
 TTATTTTATT TATTTATTTA TTTATTTTAT T

  Submitted Frequency for ss79688370 back to top
There is no frequency submission for ss79688370.


  dbSNP summary of Genotypes for ss79688370 back to top
No sufficient data to compute Hardy-weinberg probability for ss79688370.


  Submitted individual genotype for ss79688370 back to top
There is no individual genotype data for ss79688370.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement