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Submitted SNP(ss) Details: ss7991038           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011516.5_155993
RefSNP(rs#)rs2845088
Submitted Batch ID10-APR-2003
Submitted DateApr 15, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 15 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA11321
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22SNP11321121i01.q1kposition:486quality:51sequence:22SNP11321-199c08.q1kposition:62quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss7991038|allelePos=401|len=801|taxid=9606|alleles='G/A'|mol=Genomic
 AATAACTttt ttgtttgttt gtttgttttt atttttgtat gagactgggt ctggcttttt
 cacccaggct gaagtgcagt ggtgcagtca cagctcactg cagccacttc ctgggctcaa
 gccaccctcc cacctcagct tcccaggtaa cttaggacta caggtgtaca ccactatcat
 tggctaattt ttgtattttt tccagagaca aggtctcact gtctcactga gctcaggctg
 gtctcaaatt cttgagctca agagatttac cagtctcagc cttccaaagt gctaggatta
 caggcatgag acactgtgcc tggccAGTAA TTTTGTTTTA TTATATTAAG GTCAGGTTTA
 TACCACtttc ttctgattac agaagtaata catgctcatt
 R
 tataacactg aaaatgtaag cagtataaag aagaaaataa aaaagaatat gaaaatcact
 agtggtccca ttgcctaccg atacactatG TGCTGCTTTC TAATCTTTAC TTACTCTCCC
 TCCAtgtgtg tctttgtgtg tgtgtgtgtc cgtctgtgtg tTTTTTTTTT TGGCACATAG
 GACAATAGCT GACATTTATA GCTCCCCTAC CAGTGTTGAG CATTATGTTA AGCAATTGAA
 AAAGTGTATT TTAACTCCTA CAGAAAACCT ATAAAGGGGA AGGGCAGTAT AATTAACAGA
 ATTTTCCAGA TGAAAAGACT GGGACCTGAC TTCAGGTCAC ATTTTATATA CAGCATTACA
 TTTTACTTCA GACACTTAAC AAAGTAAGTG TCCTGGAGAA

  Submitted Frequency for ss7991038 back to top
There is no frequency submission for ss7991038.


  dbSNP summary of Genotypes for ss7991038 back to top
No sufficient data to compute Hardy-weinberg probability for ss7991038.


  Submitted individual genotype for ss7991038 back to top
There is no individual genotype data for ss7991038.

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