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Submitted SNP(ss) Details: ss7991040           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011516.5_16030
RefSNP(rs#)rs5746267
Submitted Batch ID10-APR-2003
Submitted DateApr 15, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 15 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22SNP11321130c12.p1kposition:212quality:51

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss7991040|allelePos=401|len=801|taxid=9606|alleles='G/A'|mol=Genomic
 GGGTGGTggg gagtggggag atctgtgcag ggggaagcat attacagaag cgagaaacaa
 agacagttat tcaattaatt gagacgtgca ttatatcatt tcttactttt caaggaaaaa
 catgttttac gacttgagtt tatctgtcta gtgaccttgc agctgcacag ctagagaaat
 agagtcttca caatgcctgg gaaaggaaga gagatgaggc tcactagcca cagaaaaaca
 ggcagttaat ttttaaaggg ctccagctct ttctctttct caggggggat ttgggttttc
 ttacatacaa ctgagtttct gcttacacat tctttaattt cttttaattc ctgttccGCT
 tggaccaggg ccagggcacc actgccctgt accaccccca
 R
 gagggtgttc cttgcatcct ggcccttcta gctccagcct tggttcaaag ggctccagat
 gagctcaggc catggcctca gagggtgcaa actataagcc ttggtggctt ccatgtggtg
 ttaagcctgc aggtgagcaa agtgcaagag tgaaggaggc ttgtcattct ctgcctaaat
 ttcagaggat gtatgagaaa ggctggatgc ccagggagaa gcctatgccc ggctggagcc
 ctcaaagagg acctcttcta ggacagtgcc aagtggaaat gtggggttgg aggccccaca
 cggggtcctg actggggggg cgggggctgc ctagtggagc tgtgggaggg gggctgctgc
 cctccagatc ccagaatgat agagccacca gcagcTCATG

  Submitted Frequency for ss7991040 back to top
There is no frequency submission for ss7991040.


  dbSNP summary of Genotypes for ss7991040 back to top
No sufficient data to compute Hardy-weinberg probability for ss7991040.


  Submitted individual genotype for ss7991040 back to top
There is no individual genotype data for ss7991040.

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