Submitted SNP(ss) Details: ss80750523

Submitted SNP(ss) Details: ss80750523

Submitter
Handle	KRIBB_YJKIM
Submitter SNP ID	KHS1000260
RefSNP(rs#)	rs75387
Submitted Batch ID	KHB2007_2_FP-TDI
Submitted Date	Nov 26, 2007
Publication Cited	16376517
First entry to dbSNP	Nov 26 2007 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	FP-TDI
Ascertainment Samplesize	176
Population	KHP_Korean

Allele
Observed Allele	C/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 AGACACACTT TATTCCCTTG AAGGTGATAA CAGGGACCAC ACACTGTTCC CACCCACTCT
 GAGCTGCCAT GCTCCTCTCC ACAACGGATA GGGAAATA
 Y
 CATGCTCAAA TCCCACCAGT AGCTAACGGC CCACAAGGGG TTCGCTCCTC CACCGGGAGA
 ACCTGTATCT AGCACCTGCA CTCCTTCAGG AGCGGCCCTA AGTGATCGGA CTGATCCATC
 CCCAGGCTTC GGTCTGGAAA GTTCAGCTTT ATATATAGTC AGGGCACTTA GGCTGAGCTC
 ACTCCTAGTC CAAGCAGGAA AGACTCCAAG CCTTCTGCTT CCTTCTTGAC TAAGCCGAGA
 GCAGAGGAGC CGGACAGCTG CCCGAGAGGT GCGTGACAGG AACCCACAGG CAGCAGGCCA

Submitted Frequency for ss80750523

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
KHP1 - EAST ASIA	176	C=0.65340900	T=0.34659100		C/C=0.45454499 C/T=0.39772701 T/T=0.14772700		KHB2007_2_FP-TDI	KRIBB_YJKIM

dbSNP summary of Genotypes for ss80750523

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
KHP_Korean - EAST ASIA	176	176	C=0.65340906	T=0.34659091	C/C=0.45454547 C/T=0.39772728 T/T=0.14772727	Pr(chiSq=1.307,df=1) =0.254	Genotype Freq.

Submitted individual genotype for ss80750523

There is no individual genotype data for ss80750523.

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