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Submitted SNP(ss) Details: ss80753391           
Submitter
HandleKRIBB_YJKIM
Submitter SNP IDKHS1000014
RefSNP(rs#)rs1097
Submitted Batch IDKHB2007_2_AFFYMETRIX_MIP
Submitted DateNov 26, 2007
Publication Cited16376517
First entry to dbSNPNov 26 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodAFFYMETRIX_MIP
Ascertainment Samplesize172
PopulationKHP_Korean
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss80753391|allelePos=51|len=101|taxid=9606|alleles='C/G'|mol=Genomic
 GGAAGGGACA GATCTAATGA GCCATCAGTG GGTTCTCCCC AGAGTAAAAG
 S
 GTTTTCTCTG GGACTTGGCA GTACTGAAGG TCCCGGACTA ACAATGATTC

  Submitted Frequency for ss80753391 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
KHP1
EAST ASIA
172C=0.77907002
G=0.22093000
C/C=0.58139497
C/G=0.39534900
G/G=0.02325600
KHB2007_2_AFFYMETRIX_MIPKRIBB_YJKIM


  dbSNP summary of Genotypes for ss80753391 back to top

Population ID
 -Class
Total
Sample
(2N)
Founder
(2N)
Major
Allele
Freq.
Minor
Allele
Freq.
Genotype
Freq.
HWE Goodness of FitData
Source
KHP_Korean
EAST ASIA
172172C=0.77906978
G=0.22093023C/C=0.58139533
C/G=0.39534885
G/G=0.02325581
Pr(chiSq=1.896,df=1)
=0.200
Genotype
Freq.

  Submitted individual genotype for ss80753391 back to top
There is no individual genotype data for ss80753391.

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