Submitted SNP(ss) Details: ss80753396

Submitted SNP(ss) Details: ss80753396

Submitter
Handle	KRIBB_YJKIM
Submitter SNP ID	KHS1000017
RefSNP(rs#)	rs1478
Submitted Batch ID	KHB2007_2_AFFYMETRIX_MIP
Submitted Date	Nov 26, 2007
Publication Cited	16376517
First entry to dbSNP	Nov 26 2007 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFFYMETRIX_MIP
Ascertainment Samplesize	180
Population	KHP_Korean

Allele
Observed Allele	G/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TGGTAATGGC AGGTTGTCTT TAAAAAAAGA AAGAAGCATC AAGGAGAGAA GCCCCACAGG
 GCAAAGAGAG ACATTTCACT CAGAGGCCAA AGTCTGGGGG
 K
 TAGAAAGAAG GAAGCTTGAC CCAAACAAAG TTTCATTTAC AGTATATACA GTCAGGCCTT
 GGGGGCAGGA GCTGCTGGGG AGCAGAGAGG GACCCTCTAT

Submitted Frequency for ss80753396

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
KHP1 - EAST ASIA	180	T=0.89999998	G=0.10000000		T/T=0.80000001 G/T=0.20000000 G/G=0.00000000		KHB2007_2_AFFYMETRIX_MIP	KRIBB_YJKIM

dbSNP summary of Genotypes for ss80753396

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
KHP_Korean - EAST ASIA	180	180	T=0.89999998	G=0.10000000	T/T=0.80000001 G/T=0.20000000	Pr(chiSq=0.211,df=1) =0.655	Genotype Freq.

Submitted individual genotype for ss80753396

There is no individual genotype data for ss80753396.

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