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Submitted SNP(ss) Details: ss8175403           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011530.10_570564
RefSNP(rs#)rs5904492
Submitted Batch ID10-APR-2003b
Submitted DateApr 16, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 16 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHRX_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:XSNP49605-271c12.p1kposition:216quality:28

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8175403|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic
 tggtttgcta cagctatcaa cccatcatct aggttttaag ccctgcatac attaggtatt
 tgtcctaatg ctccctcccc ttgctcccca ccccgcaaca ggccctggtg tgtgatgttc
 ccctccttgt gtccatgtgt tctcattgtt caactctcac ttatgagtga gaacatgcag
 tgtttggttt tctgttcctc tgttagtttg ctgagaatga tggtttccag cttcatccat
 gtccctgcaa aggaaaagaa ctcattcctt ttttatggct gcatagtatt ccatggtgta
 tatgtgctac attttcttta tcctgtctat cactgatggg tatttgggtt ggttccaagt
 caacatcttt tctttataaa ttacctggtc tcagctattt
 Y
 tttatagcaa tgtgagaatg aactaataca GAACATTTCC CATATGCACT GTAGATGTGG
 GAAGGAAGGC ACACAGCCAA GCAGGGCTAG CAGGATGCTA CTACCCTAAT AGAGTTTACC
 TTAATACATT TATCCTGCTC TAAGTCTGGC TCTCAGTTGC CAAAATCTAT GAGCTTTATC
 TCAGAGAGCC TGATTCACAC TAACCCACAA GGGACTAAAA CACCCCAATA TGCTTCATGA
 TTAATTTTTT ATTGCAAAAT ATAACTATCA TGCAGACATT TTATGCTTAT CTGTTTAACC
 AGTACATTTT TTTTCCTTTA GACATGCTAT AGGGGATAAC CATCCCAAGA TAGTTTGAGA
 TTTATGGAGT TAGAGCAAAG AAAGAGGACT TGAATGTTAA

  Submitted Frequency for ss8175403 back to top
There is no frequency submission for ss8175403.


  dbSNP summary of Genotypes for ss8175403 back to top
No sufficient data to compute Hardy-weinberg probability for ss8175403.


  Submitted individual genotype for ss8175403 back to top
There is no individual genotype data for ss8175403.

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