| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011530.10_1142264 | | RefSNP(rs#) | rs4578084 | | Submitted Batch ID | 10-APR-2003c | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011530
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHRX_NA17119 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 1 | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:XSNP51152-461c10.q1kaposition:149quality:40 |
>gnl|dbSNP|ss8236462|allelePos=401|len=801|taxid=9606|alleles='C/T'|mol=Genomic ACAGGCACGA GCCACCGCGC CCAGCCCAGA AGGCCTTTTC GGCATCCCTG AAATATAACC
TGAGCACCGC TGTCTGCTCA GGGCCTGAAG TTGGAAGTGG TTACCTTTAT CCCTTGTTTA
TCTGGATGTC ATTACGATTT TTTTTTCAAG TGCAGTGAAG AATTAAAGAT CTTGTCCACC
AAACAAACAA ATAATAAATA AATAAACTTT CTCAGTCATA ACTCTAAGAA ACTTTTCACT
ATGTTTACCA TAAAGATACT TTTGTCAGCA CAATTAAACT GACCTTTCTG AGACAGAATT
GGGAGATACT TTGTACCCTG GTCTCAGTAG CAGTGGTGCT TTTCCTGAGT AACTAGTTTA
CTTTTCCCCA TATAGATTTC GCATAGTTTG AAAGTGTCCA
Y
TTTCCTATGG GCATTTGGAA ACCTGAGAGC CTAAAGTGTT GATCCACCTC TGGCATGAAC
ACTATTGTGT TCCAACCTTA CTTCTGGTTC CCTATTAGTT TACTGACATT ATTTGTCCTT
TGACTCACAT TTTTCATATT TTAATGGGCT TTTATTTTGC TATGTTACAG GGATTTTGTA
AACGGCTTGA AGTTCTTTAT GAATCAAGGT AAGATAACAA TGTGTGCACA TATTCACATA
TATTCATAGA GTTCTTGGAC TGTGAAATTT GGGGGATGTA AATGTAAGCG TATTTGTGAC
AGCCAAGTAA TTTTACTTTC TCTACAGTAA CAACAGTTGG AAATGAAAGT AAAACTTTAT
AGAAGAAGAG CTAAATTAGA GAATTTAATT ATTATAACAG
There is no frequency submission for ss8236462.
No sufficient data to compute Hardy-weinberg probability for ss8236462.
There is no individual genotype data for ss8236462.
| 
