NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss8284971           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011516.5_121217
RefSNP(rs#)rs1977919
Submitted Batch ID10-APR-2003d
Submitted DateApr 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA10470
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22SNP10470-217o14.q1kposition:128quality:56sequence:22SNP10470-269n21.p1kposition:-162quality:40

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8284971|allelePos=401|len=801|taxid=9606|alleles='T/C'|mol=Genomic
 TTATCCACTG GGTTTTGTTT CCTACTTTTT TGATTTGTGT TAAGAAAGGG GAAAAAAATC
 ACAAGTTTGT CTAACCATTC AGTAGAAAAA CAGAGCATTT GCAGACAACT TGGCAAGGGT
 AGAGAAATGG ATGTACTGTT TTTCAGTATT TGGGGAAGGT GGTTTGAGCA GTATTTATTG
 ACAATTTCAT TAGTGGGGAT GTTTCTATTA AAAACACATA GTAAGATCAT TAAGTGTTCT
 TGCAATATAA AGTAATAATA CCACCAGTGT TTATCTTACT GTTTTCATGT TCTAAATGCA
 TGCACCTGAG TAAAAGGATC TGGGCTGCAG TCTAGGCTGA GAGATGCCAG CAAAGGCTGC
 CTAGGCCAGT GCAGTCCAGT AAATCCCTCT TTAATCTTCT
 Y
 TTCCACACAG ACAGCAGTGA TGAGCATGCC CACGAACCCA CATGATTATT TTGGGAAAAA
 TGAAAGAGTT GTATTCTTTT TGTGGTAGTA ATTCCACTTC CAGGGGCAAA TACATTTTGA
 TTATTTTATC ACCTTTCAGT GAGTTGTTTT TGTTCTTTAA CCAAGGATGT ATGTTTGAGG
 TAAGAAGTAA AGCATAAAGT ATATGATTTT TTGTGTGTAT TTTTATCTTG CTATACCCAT
 AGGGAATGTT TAATTCTGCC TTGGAAGTGG CCATATTTGA AGGTGCTGTG ATTCAAACTG
 TCAGCGAGAT AAGGCAGCAG ATCAAGAAAG CACTCCGGGC TCCAGAAGGA GCCTTCCAGG
 CCAGCTTTGA GCATAAGCTG CTGATGAGCA GTGAGTGTCT

  Submitted Frequency for ss8284971 back to top
There is no frequency submission for ss8284971.


  dbSNP summary of Genotypes for ss8284971 back to top
No sufficient data to compute Hardy-weinberg probability for ss8284971.


  Submitted individual genotype for ss8284971 back to top
There is no individual genotype data for ss8284971.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement