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Submitted SNP(ss) Details: ss8284979           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011516.5_179334
RefSNP(rs#)rs5991993
Submitted Batch ID10-APR-2003d
Submitted DateApr 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22SNP10470-255b15.q1kposition:376quality:56

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8284979|allelePos=401|len=801|taxid=9606|alleles='C/G'|mol=Genomic
 TGTGGTTCTA TGGTGTTCAC CTCTGCGTTT TACTGACCAC TAATTGGCCA GAGCTCCTAA
 GGCCTATAGG GGTCCCCCTG CCCCACCGGG TGCTTTAGAC ACTCCTGAGG GACATTCATG
 GCTCAGGAGG ATAAAGGTCC TCAGGGGCCT GCTGTGAGGA GGACATGCAG CCCCTCTGCC
 GCCGCGTCTT CTGCCATTCC AGCCTGGAAA GAGATACCTT GCCCTCCACC CCACAGGCCT
 TCATGACCTT GGGACCCACT CTTTAGAGGC CACGTGCGTT TCCACTGCCA AAGCAATGAC
 ACAGGAGATG GAAAGAAATT CTTggcctgg cgcgctggct cacgcctgta gtcccagcac
 tttgggaggc caaggcgggc ggatcacgag gtcaggagat
 S
 gagaccatcc tggctagcaa ggtgaaaccc cgtctctact aagaacacac aaaaagttgg
 tgggcacctg tagtcccagc tactcgggag gctgaggcgg gagagtggcg tgaacccggg
 aggcagagct tgcagtgagc ggagatcacg ccactgcact ccagcctggg caacagagcg
 acactacgtc tcagaaaata aaaaaaaaaT TTTGCCTTCA CTATATGTCC AAGTAATTTC
 TCGATTAGAG CCCAGAGTCG TGGGGCCCAC ACCGCCAGCT GACACATGAA AGTGTGGCAA
 CGATGTGGTG GTGTCTGTGT GGCAGTGTGT CCGCATTTCT GTGTGGTGGT GTATCTGTGT
 GGCAGAGTGT CTGGTGCTAT GTCCATGTGG TGGTGTATCT

  Submitted Frequency for ss8284979 back to top
There is no frequency submission for ss8284979.


  dbSNP summary of Genotypes for ss8284979 back to top
No sufficient data to compute Hardy-weinberg probability for ss8284979.


  Submitted individual genotype for ss8284979 back to top
There is no individual genotype data for ss8284979.

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