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Submitted SNP(ss) Details: ss8309308           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011333.5_1045635
RefSNP(rs#)rs6010619
Submitted Batch ID11-APR-2003a
Submitted DateApr 17, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 4
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-34h12.q1cposition:109quality:29

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8309308|allelePos=401|len=801|taxid=9606|alleles='C/G'|mol=Genomic
 TCGTTGTTAC TGGGTGTTTT CGTGGAGATA CAGCCATACG CACAGGTGTG TTCACAAATG
 TTAATTCTAA AGGTCAAACA CCCggccagg cataagggct cagcggtaat cccagcactt
 tgggagacca agactggtgg atcacctgag gtcaggagtt taagaccagc ctgagcaaca
 gggtgaaacc ccatctctac taaaaatgcg aaaattagcc gggcatggtg gcgcacacct
 atagtcccag ctagtcggga gacagacacg agaattgctt gaacctggga catggaggtt
 gcagtgagca gagatggcgc tgctgcaccc ctgcctgggt gacagagtga caccctgtct
 caaaaaTGAA TAGATAAATA AAGATAAAAC ACCTGCTCCT
 S
 TTGGTGTCTC CAGTTTGGAT TTGGCCTGTG TAGCCTCTTC CTTCGCCTGT TGGTGGATTT
 GGCCTGCACG GATTCTGTGT GGCCTCTTCC TTCCCCTGTT GGTGGATTTG GCCTGCACGG
 ATTCTGTGTG GCCTCTTCCT TCCCCTGTTG GTGGATTTGG CCTGCACGGA TTCTGTGTGG
 CCTCTTCCTT CCCCTGTTGG TGGATTTGGC CTGCACGGAT TCTGTGTGGC CTCTTCCTTC
 CCCTGTTGGT GGATTTGGCC TGCACGGATT CTGTGTGGCC TCTTCCTTCC CCTGTTGGTG
 GATTTGGCCT GCACGGATTC TGTGTGGCCT CTTCCTTCCC ATGTTGGTGG ATTTGGCCTG
 CATGGATTCT GTGTGGCCTC TTCCTTTCCA TGTTGGTGTC

  Submitted Frequency for ss8309308 back to top
There is no frequency submission for ss8309308.


  dbSNP summary of Genotypes for ss8309308 back to top
No sufficient data to compute Hardy-weinberg probability for ss8309308.


  Submitted individual genotype for ss8309308 back to top
There is no individual genotype data for ss8309308.