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Submitted SNP(ss) Details: ss8309314           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011333.5_105003
RefSNP(rs#)rs6010624
Submitted Batch ID11-APR-2003a
Submitted DateApr 17, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleT/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-1136h06.p1cposition:333quality:33sequence:20SNP45079-1716e02.p1cposition:156quality:27

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8309314|allelePos=401|len=801|taxid=9606|alleles='T/A'|mol=Genomic
 GCCTGTGGCT CCCAGGGAAC AACCTGGACC CTCAGCATAG GACCCGCAAG CTGAGACCCT
 CCTCTGTTTT ACTGCTTCAT TTTCCATCTG TGACCAGGGC CCAGGCCACA TGCACACACC
 TGGCGTAGGA GTTACTTCGt gatgtgtttg gctgtgtccc cacccaaaat ctcatgggaa
 ttgtaatccc cataatgccc cgtgtcaagg gcaggaccag ggggaggtga ctggatcgtg
 ggggcggttc ccccaggcag ttcttgtgag agtgaatctc atgagatctg atggttttag
 aagcgtctgg cgtttgccct gctgtcactc acaccgtcct gctgcccagt gaagaaagtg
 cctgcttctc cctccaccat gattgtaggt ctcctgaggc
 W
 cccccagccc tgcagaactg tgagtcaatt caacctcttt cctttataaa ctacacagtc
 tcggcagttc tttagagcag tgcgaaaatg gactcacaca CTTGGCCTGG GCCCAGTCTT
 TCCCGGATGG ATGGTGCGAT GATCAGCCCC GTGTTCGTGA GGACGGGGCC AACCCAGACC
 CACCTGGAGT TGTAAAGTTT CATCAGCACT CAGCCCCACC TGCTCATGTA CGTACTGCTA
 TGGCTGTGTT GGCCACAGCG GCCACAGTGA GTGGTTCTGC TCAAAAGTTG AGATCCTCCG
 GCCCACGAAG CCACAGTGAC TCACTCTCTG GACCTTCACA GAAAGCATTC ACCCACCCCA
 CCCTAGGATG CGTGTCCAGA GGTGAAATGG CTCCCTCCGT

  Submitted Frequency for ss8309314 back to top
There is no frequency submission for ss8309314.


  dbSNP summary of Genotypes for ss8309314 back to top
No sufficient data to compute Hardy-weinberg probability for ss8309314.


  Submitted individual genotype for ss8309314 back to top
There is no individual genotype data for ss8309314.