| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1051853 | | RefSNP(rs#) | rs6010626 | | Submitted Batch ID | 11-APR-2003a | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA10470 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | A/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | population count: 3 | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45079-1423a01.p1cposition:556quality:37 |
>gnl|dbSNP|ss8309318|allelePos=401|len=801|taxid=9606|alleles='A/T'|mol=Genomic CTTCTGTGcg tacccaggca cgtgcacatg catgcagagt acgcacacac gcacgcacgc
ctgcacaaat ccacgcatgT TGCCAAGTCT CTGTGTTCCA GCCGTGGTGT CTGCCCCCCG
GTGTTCTCTA GTTCGGCTTC TCCGCATTTC TGTGAATGAT TCCGGCTTCT TGGTGTTCCC
AGCAGAACTC CCTCAAGTCT GCGGCGGGGC TCTGACGGCG GTGGCTTGGC TGACATGGCC
ACATTGCTGA GCCTGTTGGG GGCTTTGCGT TCCTGTTCTG GCCGTTTTTG GCTCGTTTTC
CAGGAACGGT CGTCACGCGC TCCTCTCCTA GTGCAGGCAT CATTCCTTTC CCATTGATTT
GCAGGGTTCT CTGTAAGTTC TGAGGATCCC ATATACATAT
W
CTCTCTGTAA GTTCTGAGGA TCCCATATAC ATATTCTCTC TCTAAGTTCT GAGGATCCCA
TATACATATT CTCTCTCTAA GTTCTGAGGA TCCCATGCCG ACATACATAT TCTTTCCTTG
TCTCATGCTG GTCATTTTTT CCATTTTCAT GACAGGTTTG GTGAACACAT GTTTCCTTGT
CAGATTTTTG TTCTGAGCTT GTGCCTCCCG ACCAAGATGC TAAACCGGGT CTTGTGTATT
CTCCAAACTG CACTGTAGAG TGACGGAGCT TTGTGTCTGG GCCTCCATGC CTTCTGACGT
CACCTGTGGG GGTGTGAAAG GCAGACTCTA CCTTGATTTT TCCCAGCACG CCACACCGGT
GGTTCTGTGC GCTGACCGAG CGGCTCGGCT TCCCCCAACT
There is no frequency submission for ss8309318.
No sufficient data to compute Hardy-weinberg probability for ss8309318.
There is no individual genotype data for ss8309318.
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