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Submitted SNP(ss) Details: ss8309319           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011333.5_1051860
RefSNP(rs#)rs3838002
Submitted Batch ID11-APR-2003a
Submitted DateApr 17, 2003
Publication Cited[1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-1423a01.p1cposition:549quality:37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8309319|allelePos=401|len=801|taxid=9606|alleles='G/C'|mol=Genomic
 Gcgtacccag gcacgtgcac atgcatgcag agtacgcaca cacgcacgca cgcctgcaca
 aatccacgca tgTTGCCAAG TCTCTGTGTT CCAGCCGTGG TGTCTGCCCC CCGGTGTTCT
 CTAGTTCGGC TTCTCCGCAT TTCTGTGAAT GATTCCGGCT TCTTGGTGTT CCCAGCAGAA
 CTCCCTCAAG TCTGCGGCGG GGCTCTGACG GCGGTGGCTT GGCTGACATG GCCACATTGC
 TGAGCCTGTT GGGGGCTTTG CGTTCCTGTT CTGGCCGTTT TTGGCTCGTT TTCCAGGAAC
 GGTCGTCACG CGCTCCTCTC CTAGTGCAGG CATCATTCCT TTCCCATTGA TTTGCAGGGT
 TCTCTGTAAG TTCTGAGGAT CCCATATACA TATACTCTCT
 S
 TAAGTTCTGA GGATCCCATA TACATATTCT CTCTCTAAGT TCTGAGGATC CCATATACAT
 ATTCTCTCTC TAAGTTCTGA GGATCCCATG CCGACATACA TATTCTTTCC TTGTCTCATG
 CTGGTCATTT TTTCCATTTT CATGACAGGT TTGGTGAACA CATGTTTCCT TGTCAGATTT
 TTGTTCTGAG CTTGTGCCTC CCGACCAAGA TGCTAAACCG GGTCTTGTGT ATTCTCCAAA
 CTGCACTGTA GAGTGACGGA GCTTTGTGTC TGGGCCTCCA TGCCTTCTGA CGTCACCTGT
 GGGGGTGTGA AAGGCAGACT CTACCTTGAT TTTTCCCAGC ACGCCACACC GGTGGTTCTG
 TGCGCTGACC GAGCGGCTCG GCTTCCCCCA ACTCCACTGG

  Submitted Frequency for ss8309319 back to top
There is no frequency submission for ss8309319.


  dbSNP summary of Genotypes for ss8309319 back to top
No sufficient data to compute Hardy-weinberg probability for ss8309319.


  Submitted individual genotype for ss8309319 back to top
There is no individual genotype data for ss8309319.