| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_011333.5_1051860 | | RefSNP(rs#) | rs3838002 | | Submitted Batch ID | 11-APR-2003a | | Submitted Date | Apr 17, 2003 | | Publication Cited | [1] A linkage disequilibrium map of human chromosome 20
[2] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[3] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_011333
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D | | Submission report | view |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR20_NA10470 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | G/C | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | Unknown |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
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| Comment | | sequence:20SNP45079-1423a01.p1cposition:549quality:37 |
>gnl|dbSNP|ss8309319|allelePos=401|len=801|taxid=9606|alleles='G/C'|mol=Genomic Gcgtacccag gcacgtgcac atgcatgcag agtacgcaca cacgcacgca cgcctgcaca
aatccacgca tgTTGCCAAG TCTCTGTGTT CCAGCCGTGG TGTCTGCCCC CCGGTGTTCT
CTAGTTCGGC TTCTCCGCAT TTCTGTGAAT GATTCCGGCT TCTTGGTGTT CCCAGCAGAA
CTCCCTCAAG TCTGCGGCGG GGCTCTGACG GCGGTGGCTT GGCTGACATG GCCACATTGC
TGAGCCTGTT GGGGGCTTTG CGTTCCTGTT CTGGCCGTTT TTGGCTCGTT TTCCAGGAAC
GGTCGTCACG CGCTCCTCTC CTAGTGCAGG CATCATTCCT TTCCCATTGA TTTGCAGGGT
TCTCTGTAAG TTCTGAGGAT CCCATATACA TATACTCTCT
S
TAAGTTCTGA GGATCCCATA TACATATTCT CTCTCTAAGT TCTGAGGATC CCATATACAT
ATTCTCTCTC TAAGTTCTGA GGATCCCATG CCGACATACA TATTCTTTCC TTGTCTCATG
CTGGTCATTT TTTCCATTTT CATGACAGGT TTGGTGAACA CATGTTTCCT TGTCAGATTT
TTGTTCTGAG CTTGTGCCTC CCGACCAAGA TGCTAAACCG GGTCTTGTGT ATTCTCCAAA
CTGCACTGTA GAGTGACGGA GCTTTGTGTC TGGGCCTCCA TGCCTTCTGA CGTCACCTGT
GGGGGTGTGA AAGGCAGACT CTACCTTGAT TTTTCCCAGC ACGCCACACC GGTGGTTCTG
TGCGCTGACC GAGCGGCTCG GCTTCCCCCA ACTCCACTGG
There is no frequency submission for ss8309319.
No sufficient data to compute Hardy-weinberg probability for ss8309319.
There is no individual genotype data for ss8309319.
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