Submitter | Handle | SC_SNP | Submitter SNP ID | NT_011387.8_13293637 | RefSNP(rs#) | rs6033685 | Submitted Batch ID | CHR9_12_NA07340.2a | Submitted Date | Nov 14, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Apr 17 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_011387
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR9_12_NA07340 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | A/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | population count: 2 | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:912S-889a16.q1kposition:392quality:35 |
>gnl|dbSNP|ss8340189|allelePos=2000|len=4000|taxid=9606|alleles='A/G'|mol=Genomic TTTCTGTAAG GTCAAGCAGT ATCATCCCCT CTTCTATTTC TGATTTTAGG CATTTGAGTC
TTCTCTCTTT TTTCTTGGCC GTTCTAGCTA ACAGTTTGTC AGTATTATTG ATCTTTTTGA
CAAACCAACT TTTGGATTCA TTTTCTCTAT TGTTTTTCAA TTCGTTATTT CATTAATTCC
CTCTCTAATC CTTATTATTT CCTCTTTCTA CTTGCTTTGA GCTTCGTTTG CTCTTCTTTC
TCCATTGTCT TAAGGTAGAA TGTTTGGTTG TTGATATGGG ATCTTTCTTC TTTTTTAGCG
TAGGCATTTA AACTTCCCTG TGAGCACTGC TTTCACCGCA TCCCCTAAGT TTTGGTATGT
TGTGTCTTTG TTTTCATTCA TCTCAAAATA TTTTCTTATT TTCCTCTGCT TTTATCTTAG
ACCTGTTGGT TATTTAGTAG TGCGCTGTTA AATTTACACA TGTTCGTGAA TTTCCCAAAT
CTTTCTGTTA CTTTTAATTT TATTCTCTTG TGATCAGAGG ACGTATATTG TATGATTTCA
ATCCTTTTAA ATTTATTAAG GCTTGTTGTA TAGCCTGACA TACAGTCTAT TCTGGTGAAT
GTTCCTTGTG CACTTGAGAA GAATGTTTAT TCTGTTATTG GGTACAGTGT TCTATTGATG
TCTATTAGGT CTGCTTTGTG TATACTGTTG TTCAAGTCTT GTATTTCCTT GTTGATCTTA
TGCCTCATTA TTCTATCCAA TATTTAAAGT GGAATATTTA AGTATCTGAA TATTAATGTT
GAATTGTCTG TTTTTCCCCT CGATCATGTC AGTCATGTAT TTTGGGATTC TGCTGTTAGG
TGCATATATG TTTATAATAT TTATAAATTC CTAATGAATT GATCCTCTCA TCATTACATT
GTATGCCCTT TTTATCTCTA GTAATATATT TTGTTTTAAA ATCTATTTTG TCTGATATTT
GTTTAGCCAT TACAACTTCC ATGTGATTAC TGTTTGCATG ATACATCTTC TTCCACCTTT
TTACATTCAA CTAACTTATA TATTTGAATA TAAAGTATAA CTTCTGTAGA GAGCATATAA
TTGCATCTTG TTTTTCAGTC TCGTCTGATA CCCTCTCAGC TTTTGACTGG ATTACTTAAT
CCACTCACAT CTGTGATGAT TAATTTTATG TGTCAACTTG GAGGGTGTTT TAACATGAAA
TTAGTATTTA AATCAGTGAA CACTGAGTAA AGCAGATTGC CCTATTCTGT GGGTGCCTCG
TTCAATGAAT TGACAGCTTG AATGAATAAA AAGACTGGCC TCCCTAAGCA AGAGGGAATT
CTCCAGCAGA TCACCTTCAG ACATCATTGG CACTATCGGC TTTCCTGGGT CTCTGTCTGC
TGATCTTCAG ACTATAACCG TATCCTGGGC TCTCCTGAGT CTCAAGTCTG CTGGCTCACA
CTACAGATTT TTATTTGCTA GGTTTTATAT TCATTTGAGC CAAATCCTTA TTTTATATAT
ATATGTAAAA CTTATTTTAT AAAACTATAT CATGTTATAT ATGTATACAC ATATATGTAA
TTTTATATAT ATACATATAT ATGTATGTAT GCATATGCTA CTGCTTTTTT TCTGGAGAAC
ACTAATACAA CATCTAATGT TATTATTGAT ATAGTTAGAT TTATATTGCC ATTTAATTGT
TTTCTATATG TCTCATGTGT CTATTGTGTT CCTCTATTCC TATTTTACTG CTTTATTTTG
CATTGTCAGT ATCTCTAGTG TAACATTTTA ATTTATTTAA TGGTTTTTTA TAACTTATTT
AGTTTGTTTT CTCTCAGTGG TTGCTCTAGG GCTTACCATA TACATCAGAA TTCATCAGAA
TTTACTTCAG ATTTATACTA ACTTAATTCC ATCAAGAAAC AGAAATGTTC CTCCTGTATA
GCTCTATTAC CCATTCTTCC TTTCTGTGTT ATCATTGTCA CACATATTAC ATCTATAGAT
GCCATAAACC TAACAATAC
R
TCATTATAAT GAGTACTTAA TGTAATTTTT GTCTATTAAA GAGAGATAAC AAAGAAGAGT
AGGTATTTAT TTGTAGCATT TGTTCTATGT GCTTTCTTAT TTATCATTTC TAGTTCTCTT
TATTTGTTCC CATGTGTTCA AGTTATCATC TAGTATCATT TCCTCACTCC AGTACAACTC
TGCCTCCACC CATCTCCTTT AAGTGGTTGT TGTCAAGTAC ATTGCATTTC CATCTATTAT
AGCCCCAACA ATACAATGAT ACATGTAGTG TTTTATACAC TTGATTTATA AAATTAATTA
AGACAAGAAA GAAAAATATA TATACTGTCT TTCATAATTG CAATTATCAG TGCTCTTTGT
TTTTTCTCTA TGGACTCAAT TTCCATCTGG GTTTACTTGC TTTCAGCCTA AAAATTTCCT
TTAGTATTTA TGATAAGGCA GGTCTGATAG CAGCAAATTC TTTCAGTTTT TTTTTTTTTT
CTGGATATGT CTTGATTTTT TTCTTCATTT TTGAAAGACA GTCTTTTAAG ATATAAGATT
CTTGGTTGAT TGTTGTTGTT TATTTCAGCA CTTTGAATGT GTTGCTCCAT TGCCTTCTGA
CAGCCATGAT TTCTTATAAA AAGTCAGTTG TTCATTTTAT TGGGGTTCCC TTATAAATGA
CATTTTTCTC TTGCTGCTTT CAAAATTTTC TCCTTGTCTT TGAATTTCAG TATTTTTTCT
ATGATATGTT AAACAGAAAA TAATGGATCT CTCTGTTTCC TACTTGAGTT TATTGAGCTT
CCTGAGTGTG TTTTCCAGCA AATTTGGGGA GCTTTCAGCT GCTATTTCTT CAAATACTTT
TTCTTCTCCT TTCTCTTTCT TTTCTTCTTC TAGTACTTCC ATTATGCATA TTTCAGTTTA
TTTACGGGTG TTCCACAGTT TCTCAAGGCT CTTTTTTCTT CATTTTATTT TCTCACTGTT
CTCCAGATGG TATAATCCCT ATCAGTCTAT CAAATTTGCT TATTCTTTAT TCTGCCAGTA
AAAAATCTCC TGTTGAGCCC CTTTAATAAA GTTGTTTAGT TCAGTTGTAC TTCTTGACAC
CAGAATTACC ATTTGGTTCT ATTTTTATGT CTATCTCTTT ATTGATATTC TATATTTGAT
GAGATATTGT CTTCATACTG TACTTCTTTA AGCATTTTTA AAAATTCTTT GAGCATATTT
ATAATGGCTA CTTTAAAGTC TTTATAAAAT CTGACATTTG GTCCCTCTCT GAGGAAGTTT
CTGTTGACTA TTTTGTGTGT GTGAGCATCC GTGTGTGTGT GAGAGAGAAA CAGAGAGAAA
TAACAAGTCA CTGTTCCTGT TTCTTTTGCT GTCTCGTAAT TTTTTTTTTT TTTTTGAGAC
AGAGTCTTGC TCTTTCGCCC AGGCTGGAGT GCAGTGGTGC CATCTCAGCT CACTGCAAGC
TCTGCCTCCC GGGGTTCACA CCATTCTCCT GCCTCAGCCT CCCGAGTAAC TGGGACTACA
GGCGCCCGCC ACCGCGCCCG GCTAATTTTT TGTATTTTTA GTAGAGATGG GGTTTCACCG
TGTTAGCCAG GATTGTCTCG ATCTCCTGAC CTTGTGATCT GCCCGCCTCA GCCTCCCAAA
GTGCTGGGAT TACAGACATG AGCCACCACA CCTGGCCTCT TTCGTAATTT TTTTAAAAGT
GGACATTTTA GGTAACATTT TGTAGCAACT CTGGTTATTA GTTCATCTCT TCCCTTTCTG
GGTCTTGTTT TTGTTGCTGT TTCTTTGCTC ATTTGTTTGG TGACTTAGCT AGTCCATTTT
GATAAAACCA TTTCTCTCAC AGTGTAAAGC CTTGGCTGTC ACTCCTCACA GGATGCAGCC
TTGGGCATGC ACCTGCTCAC CCTGGAATTA AAATAATTTT AGCAGTTTTC TTTGATTGTC
TCTTTCCCCT CATATCTTCA TTAAAATGTC TGTCCTTTTC ATATTATACC CAGCAATTAG
GCTCCACTAA TTACCACTAA
There is no frequency submission for ss8340189.
No sufficient data to compute Hardy-weinberg probability for ss8340189.
There is no individual genotype data for ss8340189.
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