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Submitted SNP(ss) Details: ss8340189           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011387.8_13293637
RefSNP(rs#)rs6033685
Submitted Batch IDCHR9_12_NA07340.2a
Submitted DateNov 14, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 17 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR9_12_NA07340
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:912S-889a16.q1kposition:392quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss8340189|allelePos=2000|len=4000|taxid=9606|alleles='A/G'|mol=Genomic
 TTTCTGTAAG GTCAAGCAGT ATCATCCCCT CTTCTATTTC TGATTTTAGG CATTTGAGTC
 TTCTCTCTTT TTTCTTGGCC GTTCTAGCTA ACAGTTTGTC AGTATTATTG ATCTTTTTGA
 CAAACCAACT TTTGGATTCA TTTTCTCTAT TGTTTTTCAA TTCGTTATTT CATTAATTCC
 CTCTCTAATC CTTATTATTT CCTCTTTCTA CTTGCTTTGA GCTTCGTTTG CTCTTCTTTC
 TCCATTGTCT TAAGGTAGAA TGTTTGGTTG TTGATATGGG ATCTTTCTTC TTTTTTAGCG
 TAGGCATTTA AACTTCCCTG TGAGCACTGC TTTCACCGCA TCCCCTAAGT TTTGGTATGT
 TGTGTCTTTG TTTTCATTCA TCTCAAAATA TTTTCTTATT TTCCTCTGCT TTTATCTTAG
 ACCTGTTGGT TATTTAGTAG TGCGCTGTTA AATTTACACA TGTTCGTGAA TTTCCCAAAT
 CTTTCTGTTA CTTTTAATTT TATTCTCTTG TGATCAGAGG ACGTATATTG TATGATTTCA
 ATCCTTTTAA ATTTATTAAG GCTTGTTGTA TAGCCTGACA TACAGTCTAT TCTGGTGAAT
 GTTCCTTGTG CACTTGAGAA GAATGTTTAT TCTGTTATTG GGTACAGTGT TCTATTGATG
 TCTATTAGGT CTGCTTTGTG TATACTGTTG TTCAAGTCTT GTATTTCCTT GTTGATCTTA
 TGCCTCATTA TTCTATCCAA TATTTAAAGT GGAATATTTA AGTATCTGAA TATTAATGTT
 GAATTGTCTG TTTTTCCCCT CGATCATGTC AGTCATGTAT TTTGGGATTC TGCTGTTAGG
 TGCATATATG TTTATAATAT TTATAAATTC CTAATGAATT GATCCTCTCA TCATTACATT
 GTATGCCCTT TTTATCTCTA GTAATATATT TTGTTTTAAA ATCTATTTTG TCTGATATTT
 GTTTAGCCAT TACAACTTCC ATGTGATTAC TGTTTGCATG ATACATCTTC TTCCACCTTT
 TTACATTCAA CTAACTTATA TATTTGAATA TAAAGTATAA CTTCTGTAGA GAGCATATAA
 TTGCATCTTG TTTTTCAGTC TCGTCTGATA CCCTCTCAGC TTTTGACTGG ATTACTTAAT
 CCACTCACAT CTGTGATGAT TAATTTTATG TGTCAACTTG GAGGGTGTTT TAACATGAAA
 TTAGTATTTA AATCAGTGAA CACTGAGTAA AGCAGATTGC CCTATTCTGT GGGTGCCTCG
 TTCAATGAAT TGACAGCTTG AATGAATAAA AAGACTGGCC TCCCTAAGCA AGAGGGAATT
 CTCCAGCAGA TCACCTTCAG ACATCATTGG CACTATCGGC TTTCCTGGGT CTCTGTCTGC
 TGATCTTCAG ACTATAACCG TATCCTGGGC TCTCCTGAGT CTCAAGTCTG CTGGCTCACA
 CTACAGATTT TTATTTGCTA GGTTTTATAT TCATTTGAGC CAAATCCTTA TTTTATATAT
 ATATGTAAAA CTTATTTTAT AAAACTATAT CATGTTATAT ATGTATACAC ATATATGTAA
 TTTTATATAT ATACATATAT ATGTATGTAT GCATATGCTA CTGCTTTTTT TCTGGAGAAC
 ACTAATACAA CATCTAATGT TATTATTGAT ATAGTTAGAT TTATATTGCC ATTTAATTGT
 TTTCTATATG TCTCATGTGT CTATTGTGTT CCTCTATTCC TATTTTACTG CTTTATTTTG
 CATTGTCAGT ATCTCTAGTG TAACATTTTA ATTTATTTAA TGGTTTTTTA TAACTTATTT
 AGTTTGTTTT CTCTCAGTGG TTGCTCTAGG GCTTACCATA TACATCAGAA TTCATCAGAA
 TTTACTTCAG ATTTATACTA ACTTAATTCC ATCAAGAAAC AGAAATGTTC CTCCTGTATA
 GCTCTATTAC CCATTCTTCC TTTCTGTGTT ATCATTGTCA CACATATTAC ATCTATAGAT
 GCCATAAACC TAACAATAC
 R
 TCATTATAAT GAGTACTTAA TGTAATTTTT GTCTATTAAA GAGAGATAAC AAAGAAGAGT
 AGGTATTTAT TTGTAGCATT TGTTCTATGT GCTTTCTTAT TTATCATTTC TAGTTCTCTT
 TATTTGTTCC CATGTGTTCA AGTTATCATC TAGTATCATT TCCTCACTCC AGTACAACTC
 TGCCTCCACC CATCTCCTTT AAGTGGTTGT TGTCAAGTAC ATTGCATTTC CATCTATTAT
 AGCCCCAACA ATACAATGAT ACATGTAGTG TTTTATACAC TTGATTTATA AAATTAATTA
 AGACAAGAAA GAAAAATATA TATACTGTCT TTCATAATTG CAATTATCAG TGCTCTTTGT
 TTTTTCTCTA TGGACTCAAT TTCCATCTGG GTTTACTTGC TTTCAGCCTA AAAATTTCCT
 TTAGTATTTA TGATAAGGCA GGTCTGATAG CAGCAAATTC TTTCAGTTTT TTTTTTTTTT
 CTGGATATGT CTTGATTTTT TTCTTCATTT TTGAAAGACA GTCTTTTAAG ATATAAGATT
 CTTGGTTGAT TGTTGTTGTT TATTTCAGCA CTTTGAATGT GTTGCTCCAT TGCCTTCTGA
 CAGCCATGAT TTCTTATAAA AAGTCAGTTG TTCATTTTAT TGGGGTTCCC TTATAAATGA
 CATTTTTCTC TTGCTGCTTT CAAAATTTTC TCCTTGTCTT TGAATTTCAG TATTTTTTCT
 ATGATATGTT AAACAGAAAA TAATGGATCT CTCTGTTTCC TACTTGAGTT TATTGAGCTT
 CCTGAGTGTG TTTTCCAGCA AATTTGGGGA GCTTTCAGCT GCTATTTCTT CAAATACTTT
 TTCTTCTCCT TTCTCTTTCT TTTCTTCTTC TAGTACTTCC ATTATGCATA TTTCAGTTTA
 TTTACGGGTG TTCCACAGTT TCTCAAGGCT CTTTTTTCTT CATTTTATTT TCTCACTGTT
 CTCCAGATGG TATAATCCCT ATCAGTCTAT CAAATTTGCT TATTCTTTAT TCTGCCAGTA
 AAAAATCTCC TGTTGAGCCC CTTTAATAAA GTTGTTTAGT TCAGTTGTAC TTCTTGACAC
 CAGAATTACC ATTTGGTTCT ATTTTTATGT CTATCTCTTT ATTGATATTC TATATTTGAT
 GAGATATTGT CTTCATACTG TACTTCTTTA AGCATTTTTA AAAATTCTTT GAGCATATTT
 ATAATGGCTA CTTTAAAGTC TTTATAAAAT CTGACATTTG GTCCCTCTCT GAGGAAGTTT
 CTGTTGACTA TTTTGTGTGT GTGAGCATCC GTGTGTGTGT GAGAGAGAAA CAGAGAGAAA
 TAACAAGTCA CTGTTCCTGT TTCTTTTGCT GTCTCGTAAT TTTTTTTTTT TTTTTGAGAC
 AGAGTCTTGC TCTTTCGCCC AGGCTGGAGT GCAGTGGTGC CATCTCAGCT CACTGCAAGC
 TCTGCCTCCC GGGGTTCACA CCATTCTCCT GCCTCAGCCT CCCGAGTAAC TGGGACTACA
 GGCGCCCGCC ACCGCGCCCG GCTAATTTTT TGTATTTTTA GTAGAGATGG GGTTTCACCG
 TGTTAGCCAG GATTGTCTCG ATCTCCTGAC CTTGTGATCT GCCCGCCTCA GCCTCCCAAA
 GTGCTGGGAT TACAGACATG AGCCACCACA CCTGGCCTCT TTCGTAATTT TTTTAAAAGT
 GGACATTTTA GGTAACATTT TGTAGCAACT CTGGTTATTA GTTCATCTCT TCCCTTTCTG
 GGTCTTGTTT TTGTTGCTGT TTCTTTGCTC ATTTGTTTGG TGACTTAGCT AGTCCATTTT
 GATAAAACCA TTTCTCTCAC AGTGTAAAGC CTTGGCTGTC ACTCCTCACA GGATGCAGCC
 TTGGGCATGC ACCTGCTCAC CCTGGAATTA AAATAATTTT AGCAGTTTTC TTTGATTGTC
 TCTTTCCCCT CATATCTTCA TTAAAATGTC TGTCCTTTTC ATATTATACC CAGCAATTAG
 GCTCCACTAA TTACCACTAA

  Submitted Frequency for ss8340189 back to top
There is no frequency submission for ss8340189.


  dbSNP summary of Genotypes for ss8340189 back to top
No sufficient data to compute Hardy-weinberg probability for ss8340189.


  Submitted individual genotype for ss8340189 back to top
There is no individual genotype data for ss8340189.

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